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Find_novel_viruses
ababaian edited this page Jul 15, 2021
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We are often asked, "How do I find novel RNA viruses related to X?". These tutorial outlines multiple lines of attack for this question, in increasing difficulty and rigour.
A. Serratus.io Lookup [15 m]
The easiest way to navigate to a novel virus is to use the serratus.io graphical web interface. "Click to discover".
B. RdRP palmprint sequence-search [2-4 h]
Sequence-based search with high specificity for novel viruses based on PalmDB sequences. "Script to discover".
C. RdRP microassembly sequence-search [2-4 h]
Sequence-based search with high sensitivity for novel viruses based on micro-assembled sequences. "Script to discover".