Skip to content

Issues: tatonetti-lab/onsides

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

33 Open 21 Closed
33 Open 21 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Missing events in onsides
#61 opened Sep 18, 2024 by ntatonetti
1
DailyMed bulk downloads don't seem to contain all historical versions
#60 opened Aug 30, 2024 by ntatonetti
pt to llt
#59 opened Aug 29, 2024 by sophiaKivelson
upload_date in dm_spl_zip_files_meta_data is in MM/DD/YYYY format bug Something isn't working
#58 opened Aug 27, 2024 by ntatonetti
@ntatonetti
Problem w/ candesartan
#57 opened Jul 15, 2024 by undinag
Add argument for label type
#51 opened Dec 1, 2023 by gsirdeshmukh
Implement tracking strategy for deployment_tracker
#50 opened Dec 1, 2023 by gsirdeshmukh
Move processing of deepcadrme output to a script
#48 opened Dec 1, 2023 by gsirdeshmukh
download_and_verify does not properly check for already downloaded and verified file
#46 opened Oct 24, 2023 by ntatonetti
@gsirdeshmukh
Mapping of drug and side effect IDs
#45 opened May 26, 2023 by calyptis
Investigate if and when the set ids for the labels change
#44 opened May 4, 2023 by ntatonetti
Extract source of side effect information enhancement New feature or request
#43 opened Feb 27, 2023 by ntatonetti v3.0.0
Bug in TWOSIDES
#41 opened Jan 23, 2023 by jasperhyp
Extracting TWOSIDES-like polypharmacy side effects from ONSIDES
#40 opened Jan 23, 2023 by jasperhyp
Extract contraindications from labels
#39 opened Jan 8, 2023 by ntatonetti v3.0.0
some rows have data loss for columns ingredient_rxcuis and ingredient_names
#38 opened Nov 17, 2022 by ntatonetti
Add description of semantic versioning for OnSIDES documentation Improvements or additions to documentation
#34 opened Nov 13, 2022 by ntatonetti
Add some notes on running time/computational requirements documentation Improvements or additions to documentation
#33 opened Nov 13, 2022 by ntatonetti v2.1.0
1
Add website (nsides.io) markdown files to source control website
#32 opened Nov 13, 2022 by ntatonetti
Create another reference set of 50-100 labels evaluation
#31 opened Nov 13, 2022 by ntatonetti
Add ability to continue a previously incomplete run enhancement New feature or request
#30 opened Nov 13, 2022 by ntatonetti
OTC Labels
#29 opened Nov 13, 2022 by ntatonetti
@ntatonetti
1
OVERDOSAGE enhancement New feature or request
#28 opened Nov 13, 2022 by ntatonetti v3.0.0
@klarow
1
Characterize reference sets evaluation
#27 opened Nov 13, 2022 by ntatonetti
Look into using manual curation flags
#26 opened Nov 13, 2022 by ntatonetti
ProTip! Add no:assignee to see everything that’s not assigned.