Skip to content

Actions: samtools/htsjdk

Actions

All workflows

Actions

Loading...
Loading

Showing runs from all workflows
160 workflow runs
160 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

Implementation of CRAM 3.1 codecs. Build and Test #377: Pull request #1714 synchronize by cmnbroad
November 13, 2024 23:30 19m 6s cn_cram_3_1_codecs
cn_cram_3_1_codecs
November 13, 2024 23:30 19m 6s
Implementation of CRAM 3.1 codecs. Build and Test #376: Pull request #1714 synchronize by cmnbroad
November 13, 2024 21:42 18m 30s cn_cram_3_1_codecs
cn_cram_3_1_codecs
November 13, 2024 21:42 18m 30s
Improve GFF API by adding new convenience methods Build and Test #375: Commit dbebac3 pushed by lbergelson
October 29, 2024 16:27 20m 23s master
master
October 29, 2024 16:27 20m 23s
Treat .vcf.bgz as a valid vcf extension in FileExtension (#1727) Build and Test #374: Commit 4ea3285 pushed by lbergelson
October 29, 2024 16:23 18m 56s master
master
October 29, 2024 16:23 18m 56s
improve gff: add Locatable to Gff3BaseData, add 'Optional<String> getAttr(key)' and 'hasAttribute' Build and Test #373: Pull request #1726 synchronize by lindenb
October 29, 2024 15:47 19m 43s lindenb:pl_gtf_att
lindenb:pl_gtf_att
October 29, 2024 15:47 19m 43s
improve gff: add Locatable to Gff3BaseData, add 'Optional<String> getAttr(key)' and 'hasAttribute' Build and Test #372: Pull request #1726 synchronize by lindenb
October 29, 2024 15:03 19m 8s lindenb:pl_gtf_att
lindenb:pl_gtf_att
October 29, 2024 15:03 19m 8s
.vcf.bgz as a valid vcf extension in FileExtensions Build and Test #371: Pull request #1727 synchronize by lindenb
October 29, 2024 13:38 19m 4s lindenb:pl_vcfconstants
lindenb:pl_vcfconstants
October 29, 2024 13:38 19m 4s
.vcf.bgz as a valid vcf extension in FileExtensions Build and Test #370: Pull request #1727 opened by lindenb
October 29, 2024 12:58 18m 58s lindenb:pl_vcfconstants
lindenb:pl_vcfconstants
October 29, 2024 12:58 18m 58s
improve gff: add Locatable to Gff3BaseData, add 'Optional<String> getAttr(key)' and 'hasAttribute' Build and Test #369: Pull request #1726 opened by lindenb
October 29, 2024 11:12 19m 45s lindenb:pl_gtf_att
lindenb:pl_gtf_att
October 29, 2024 11:12 19m 45s
Add ReferenceSequenceFile.getSubsequenceAt(final Locatable locatable … Build and Test #368: Commit fd56496 pushed by lbergelson
October 28, 2024 20:56 20m 17s master
master
October 28, 2024 20:56 20m 17s
add ReferenceSequenceFile.getSubsequenceAt(final Locatable locatable ) shortcut to getSubsequenceAt(loc.getContig(), loc.getStart(), loc.getEnd()) Build and Test #367: Pull request #1725 opened by lindenb
October 28, 2024 13:31 20m 55s lindenb:pl_reference_locatable
lindenb:pl_reference_locatable
October 28, 2024 13:31 20m 55s
Adding additional java versions to our test matrix and toolchains Build and Test #366: Pull request #1723 opened by lbergelson
October 11, 2024 16:07 46s lb_add_new_versions_to_tests
lb_add_new_versions_to_tests
October 11, 2024 16:07 46s
Carrot setup Build and Test #365: Pull request #1721 synchronize by lbergelson
October 8, 2024 21:51 19m 47s lb_carrot
lb_carrot
October 8, 2024 21:51 19m 47s
Carrot setup Build and Test #364: Pull request #1721 synchronize by lbergelson
October 8, 2024 21:35 19m 52s lb_carrot
lb_carrot
October 8, 2024 21:35 19m 52s
Carrot setup Build and Test #363: Pull request #1721 synchronize by lbergelson
October 8, 2024 21:21 19m 58s lb_carrot
lb_carrot
October 8, 2024 21:21 19m 58s
Carrot setup Build and Test #362: Pull request #1721 opened by lbergelson
October 8, 2024 21:19 18m 49s lb_carrot
lb_carrot
October 8, 2024 21:19 18m 49s
Update commons compress to a 1.26.0 (#1720) Build and Test #361: Commit a37ffa6 pushed by lbergelson
October 7, 2024 21:34 20m 17s master
master
October 7, 2024 21:34 20m 17s
Update commons compress to a 1.26.0 Build and Test #360: Pull request #1720 opened by lbergelson
October 7, 2024 20:53 20m 40s lb_update_commons_compress
lb_update_commons_compress
October 7, 2024 20:53 20m 40s
Replace toPath().toString() with getURIString() (#1719) Build and Test #359: Commit 1cb5f07 pushed by cmnbroad
October 7, 2024 13:46 20m 3s master
master
October 7, 2024 13:46 20m 3s
Replace toPath().toString() with getURIString() Build and Test #358: Pull request #1719 opened by lbergelson
October 4, 2024 21:48 18m 52s lb_use_full_uri
lb_use_full_uri
October 4, 2024 21:48 18m 52s
SamReaderFactory opens non-regular File and Path the same way (#1717) Build and Test #357: Commit 4c1c766 pushed by lbergelson
October 2, 2024 14:52 20m 28s master
master
October 2, 2024 14:52 20m 28s
SamReaderFactory opens non-regular File and Path the same way Build and Test #356: Pull request #1717 opened by kshakir
September 29, 2024 16:53 19m 15s kshakir:ks_srf_open_irregular_path
kshakir:ks_srf_open_irregular_path
September 29, 2024 16:53 19m 15s
Make Snappy technically an optional dependency (#1715) Build and Test #355: Commit 966737b pushed by lbergelson
September 17, 2024 16:59 19m 55s master
master
September 17, 2024 16:59 19m 55s
Make Snappy technically an optional dependency Build and Test #354: Pull request #1715 opened by lbergelson
September 17, 2024 16:01 19m 39s lb_separate_snappy_loading
lb_separate_snappy_loading
September 17, 2024 16:01 19m 39s
Implementation of CRAM 3.1 codecs. Build and Test #353: Pull request #1714 opened by cmnbroad
September 4, 2024 15:55 17m 59s cn_cram_3_1_codecs
cn_cram_3_1_codecs
September 4, 2024 15:55 17m 59s