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24 Open 1 Closed
24 Open 1 Closed
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Issues list

Add dependency to easierData when possible
#27 opened Jul 28, 2021 by olapuentesantana
Create easier data package
#24 opened Apr 7, 2021 by olapuentesantana
Update compare_immune_response
#23 opened Feb 24, 2021 by olapuentesantana
@olapuentesantana
Change immune cell feature names in trained models to abbreviated ones
#22 opened Feb 24, 2021 by olapuentesantana
@olapuentesantana
Update NAMESPACE
#21 opened Feb 22, 2021 by olapuentesantana
1
compute_ICB_genes within compute_gold_standards
#20 opened Feb 19, 2021 by olapuentesantana
Tcell_inflamed calculation
#19 opened Feb 19, 2021 by olapuentesantana
3
Working off the items (warnings and notes) of R CMD check + BiocCheck (this latter not mandatory, but suggests a lot of nice coding practices)
#18 opened Feb 18, 2021 by federicomarini
CI integration - GH actions
#17 opened Feb 18, 2021 by federicomarini
change F to FALSE and T to TRUE
#16 opened Feb 18, 2021 by federicomarini
try() calls can be/should be removed
#15 opened Feb 18, 2021 by federicomarini
Consider entering biocViews
#14 opened Feb 18, 2021 by federicomarini
Dependency handling
#13 opened Feb 18, 2021 by federicomarini
3 tasks
@federicomarini @FFinotello
Probably worth having a verbose parameter
#12 opened Feb 18, 2021 by federicomarini
Keep an eye on package size - tinker with the idea of easier_data package
#11 opened Feb 18, 2021 by federicomarini
@federicomarini @eduati @olapuentesantana
Cleanup of notes from gg-based calls
#10 opened Feb 18, 2021 by federicomarini
@federicomarini
Signature handling
#9 opened Feb 18, 2021 by federicomarini
2 tasks done
@arsenij-ust
Choosing an appropriate License
#8 opened Feb 18, 2021 by federicomarini
2 tasks
Fully working examples, one ideally for each function (also guarantees that we do not break existing code)
#7 opened Feb 18, 2021 by federicomarini
A fully fledged vignette, end to end, at best on real data, to showcase the nice method and show the analysis in a “real-like” case
#6 opened Feb 18, 2021 by federicomarini
@olapuentesantana
roxygen with markdown, for ease of styling
#5 opened Feb 18, 2021 by federicomarini
2 tasks done
@federicomarini
description fields to be proper filled
#4 opened Feb 18, 2021 by federicomarini
4 tasks
Use a consistent variable/attribute style
#3 opened Feb 18, 2021 by federicomarini
4 tasks done
@federicomarini @olapuentesantana
4
Warning with compute_gold_standards function
#1 opened Dec 23, 2020 by FFinotello
ProTip! Exclude everything labeled bug with -label:bug.