Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Warning with compute_gold_standards function #1

Open
FFinotello opened this issue Dec 23, 2020 · 0 comments
Open

Warning with compute_gold_standards function #1

FFinotello opened this issue Dec 23, 2020 · 0 comments

Comments

@FFinotello
Copy link
Collaborator

When using the compute_gold_standards function, I often get this warning associated to a long list of missing signature genes:

In compute.RIR(RNA.tpm) :
  differenty named or missing signature genes

Is the method robust enough to missing genes?
Shall we consider a gene symbol remapping step to make it more robust?
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@FFinotello