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Patch biowulf config #696
Patch biowulf config #696
Commits on May 24, 2024
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Add restriction to prevent over-threading. Modify the cache names for nxf_singularity to separate it from singularity cache. Add restriction to prevent user's mis-usage of clusterOption in params.
Qi Yu committedMay 24, 2024 Configuration menu - View commit details
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move executor inside of profiles
The executor contents are moved inside of profile, so that it could run individually without cross-talking.
Qi Yu committedMay 24, 2024 Configuration menu - View commit details
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Qi Yu committed
May 24, 2024 Configuration menu - View commit details
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Commits on Jun 7, 2024
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moving executor outside of process
so that is is more clear to be able to reuse in profile
Qi Yu committedJun 7, 2024 Configuration menu - View commit details
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Commits on Sep 23, 2024
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relocate clusterOptions and scratch
move clusterOptions and scratch out of executor, and move them into process.
Qi Yu committedSep 23, 2024 Configuration menu - View commit details
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Commits on Sep 27, 2024
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Updated the cachedir for singularity
When solving the conflicts from the recent update on config file from nf-core side, the cachedir is reset to older version. Have to modify it to match our cluster setting.
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formated resourceLimits and modify the igenome_base
Remove the out of dated resourcelimits from params to process. Changed the igenome_base from /fdb/igenomes to /fdb/igenomes_nf.
Qi Yu committedSep 27, 2024 Configuration menu - View commit details
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Commits on Oct 18, 2024
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remove the singularity_cachedir, and update the resource limit to match
the recent update of cluster hardware.
Qi Yu committedOct 18, 2024 Configuration menu - View commit details
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Commits on Oct 22, 2024
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