[FIX] [WIP] NOT READY YEY

.github/workflows/system_test.yml

@@ -27,7 +27,7 @@ jobs:
       uses: actions/setup-python@v4
       with:
         python-version: ${{ matrix.python-version }}
-    - name: Install dev
+    - name: Install
       run: |
         python -m pip install --upgrade pip
-        pip install .[dev]
+        pip install .[test]

.github/workflows/test.yml

@@ -30,13 +30,5 @@ jobs:
     - name: Install
       run: |
         python -m pip install --upgrade pip
-        pip install -e .[tests]
-    - name: Run tests and coverage
-      run: make coverage
-    - name: Code coverage
-      uses: codecov/codecov-action@v3
-      with:
-        file: coverage.xml
-        flags: ${{ matrix.os }}-${{ matrix.python-version }}
-        name: codecov
-        fail_ci_if_error: false
+        pip install -e .[test]
+

.gitignore

@@ -1 +1,166 @@
 volumes/*
+
+src/loxlm/_version.py
+
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# pdm
+#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
+#pdm.lock
+#   pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
+#   in version control.
+#   https://pdm.fming.dev/latest/usage/project/#working-with-version-control
+.pdm.toml
+.pdm-python
+.pdm-build/
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/

.pre-commit-config.yaml

@@ -26,31 +26,26 @@ repos:
   hooks:
   - id: flynt
 
-- repo: https://github.com/asottile/reorder-python-imports
-  rev: v3.10.0
-  hooks:
-  - id: reorder-python-imports
-    args: [--py38-plus, --add-import, from __future__ import annotations]
-
-# - repo: https://github.com/pre-commit/mirrors-mypy
-#   rev: v1.3.0
-#   hooks:
-#   - id: mypy
-#     additional_dependencies: [types-all]
-#     files: bidspm
-#     args: [--config-file, setup.cfg]
-
-- repo: https://github.com/MarcoGorelli/auto-walrus
-  rev: v0.2.2
-  hooks:
-  - id: auto-walrus
+# Sorts Python imports alphabetically and by section with `isort`.
+-   repo: https://github.com/pycqa/isort
+    rev: 5.13.2
+    hooks:
+    -   id: isort
+        args: [--profile, black, --settings-path, pyproject.toml]
 
 - repo: https://github.com/jumanjihouse/pre-commit-hook-yamlfmt
   rev: 0.2.3
   hooks:
   - id: yamlfmt
     args: [--mapping, '2', --sequence, '2', --offset, '0']
 
+# Format TOML files
+-   repo: https://github.com/macisamuele/language-formatters-pre-commit-hooks
+    rev: v2.13.0
+    hooks:
+    -   id: pretty-format-toml
+        args: [--autofix, --indent, '4']
+
 - repo: https://github.com/codespell-project/codespell
   rev: v2.2.5
   hooks:

docker-compose.yml

@@ -1,19 +1,20 @@
+---
 version: '3.5'
 
 services:
   etcd:
     container_name: milvus-etcd
     image: quay.io/coreos/etcd:v3.5.5
     environment:
-      - ETCD_AUTO_COMPACTION_MODE=revision
-      - ETCD_AUTO_COMPACTION_RETENTION=1000
-      - ETCD_QUOTA_BACKEND_BYTES=4294967296
-      - ETCD_SNAPSHOT_COUNT=50000
+    - ETCD_AUTO_COMPACTION_MODE=revision
+    - ETCD_AUTO_COMPACTION_RETENTION=1000
+    - ETCD_QUOTA_BACKEND_BYTES=4294967296
+    - ETCD_SNAPSHOT_COUNT=50000
     volumes:
-      - ${DOCKER_VOLUME_DIRECTORY:-.}/volumes/etcd:/etcd
+    - ${DOCKER_VOLUME_DIRECTORY:-.}/volumes/etcd:/etcd
     command: etcd -advertise-client-urls=http://127.0.0.1:2379 -listen-client-urls http://0.0.0.0:2379 --data-dir /etcd
     healthcheck:
-      test: ["CMD", "etcdctl", "endpoint", "health"]
+      test: [CMD, etcdctl, endpoint, health]
       interval: 30s
       timeout: 20s
       retries: 3
@@ -25,42 +26,42 @@ services:
       MINIO_ACCESS_KEY: minioadmin
       MINIO_SECRET_KEY: minioadmin
     ports:
-      - "9001:9001"
-      - "9000:9000"
+    - 9001:9001
+    - 9000:9000
     volumes:
-      - ${DOCKER_VOLUME_DIRECTORY:-.}/volumes/minio:/minio_data
+    - ${DOCKER_VOLUME_DIRECTORY:-.}/volumes/minio:/minio_data
     command: minio server /minio_data --console-address ":9001"
     healthcheck:
-      test: ["CMD", "curl", "-f", "http://localhost:9000/minio/health/live"]
+      test: [CMD, curl, -f, http://localhost:9000/minio/health/live]
       interval: 30s
       timeout: 20s
       retries: 3
 
   standalone:
     container_name: milvus-standalone
     image: milvusdb/milvus:v2.4.1
-    command: ["milvus", "run", "standalone"]
+    command: [milvus, run, standalone]
     security_opt:
     - seccomp:unconfined
     environment:
       ETCD_ENDPOINTS: etcd:2379
       MINIO_ADDRESS: minio:9000
       APIFY_API_KEY: apify_api_qUQEtSba0coNeeNI8awoz8HnDUph7k2CHSGO
     volumes:
-      - ${DOCKER_VOLUME_DIRECTORY:-.}/volumes/milvus:/var/lib/milvus
+    - ${DOCKER_VOLUME_DIRECTORY:-.}/volumes/milvus:/var/lib/milvus
     healthcheck:
-      test: ["CMD", "curl", "-f", "http://localhost:9091/healthz"]
+      test: [CMD, curl, -f, http://localhost:9091/healthz]
       interval: 30s
       start_period: 90s
       timeout: 20s
       retries: 3
     ports:
-      - "19530:19530"
-      - "9091:9091"
+    - 19530:19530
+    - 9091:9091
     depends_on:
-      - "etcd"
-      - "minio"
+    - etcd
+    - minio
 
 networks:
   default:
-    name: milvus
+    name: milvus