Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[gromet] Updates Gromet to v0.1.10 and adds dependency generation #822

Merged
merged 19 commits into from
Feb 28, 2024
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
19 commits
Select commit Hold shift + click to select a range
b956126
Initial logic for calculating location of imported module
vincentraymond-ua Feb 15, 2024
8f63ca6
Updating Gromet to 0.1.10
vincentraymond-ua Feb 18, 2024
c365fee
Initial support for GrometFNModuleDependancyReference
vincentraymond-ua Feb 18, 2024
3c5efb8
Removing duplicate dependancies and small bug fix
vincentraymond-ua Feb 20, 2024
6c51001
Initial support for dependency_depth flag
vincentraymond-ua Feb 20, 2024
112fe8c
Adding additional filters for module_dependencies
vincentraymond-ua Feb 20, 2024
a259459
Much more efficient dependency filtering
vincentraymond-ua Feb 21, 2024
b20b273
Updating endpoint to support dependency_depth
vincentraymond-ua Feb 21, 2024
017017d
Add dependency modules to module_index
vincentraymond-ua Feb 21, 2024
4381bcd
Updating to support single file local dependencies
vincentraymond-ua Feb 21, 2024
86efb27
Adding nested dependencies to module_dependencies
vincentraymond-ua Feb 21, 2024
1fcb1ca
Generating error handling for depth <0 or >1
vincentraymond-ua Feb 21, 2024
0c27511
Adding unit tests to endpoint
vincentraymond-ua Feb 21, 2024
92fe68f
Fixing bug with System object
vincentraymond-ua Feb 21, 2024
d6c736a
Merge branch 'main' into vraymond/library_alignment
vincentraymond-ua Feb 25, 2024
a9aa9c2
Merge branch 'vraymond/library_alignment' of https://github.com/ml4ai…
vincentraymond-ua Feb 21, 2024
1f9cdde
Merge branch 'main' into vraymond/library_alignment
vincentraymond-ua Feb 26, 2024
1dfab1d
Merge branch 'main' into vraymond/library_alignment
vincentraymond-ua Feb 27, 2024
8aeb197
Merge branch 'main' into vraymond/library_alignment
vincentraymond-ua Feb 27, 2024
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
7 changes: 4 additions & 3 deletions skema/gromet/fn/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -4,9 +4,9 @@
"""
Grounded Model Exchange (GroMEt) schema for Function Networks

This document defines the GroMEt Function Network data model. Note that Metadata is defined in separate spec. __Using Swagger to Generate Class Structure__ To automatically generate Python or Java models corresponding to this document, you can use [swagger-codegen](https://swagger.io/tools/swagger-codegen/). This can be used to generate the client code based off of this spec, and in the process this will generate the data model class structure. 1. Install via the method described for your operating system [here](https://github.com/swagger-api/swagger-codegen#Prerequisites). Make sure to install a version after 3.0 that will support openapi 3. 2. Run swagger-codegen with the options in the example below. The URL references where the yaml for this documentation is stored on github. Make sure to replace CURRENT_VERSION with the correct version. (The current version is `0.1.7`.) To generate Java classes rather, change the `-l python` to `-l java`. Change the value to the `-o` option to the desired output location. ``` swagger-codegen generate -l python -o ./client -i https://raw.githubusercontent.com/ml4ai/automates-v2/master/docs/source/gromet_FN_v{CURRENT_VERSION}.yaml ``` 3. Once it executes, the client code will be generated at your specified location. For python, the classes will be located in `$OUTPUT_PATH/swagger_client/models/`. For java, they will be located in `$OUTPUT_PATH/src/main/java/io/swagger/client/model/` If generating GroMEt schema data model classes in SKEMA (AutoMATES), then after generating the above, follow the instructions here: ``` <automates>/automates/model_assembly/gromet/model/README.md ``` # noqa: E501
This document defines the GroMEt Function Network data model. Note that Metadata is defined in separate spec. __Using Swagger to Generate Class Structure__ To automatically generate Python or Java models corresponding to this document, you can use [swagger-codegen](https://swagger.io/tools/swagger-codegen/). This can be used to generate the client code based off of this spec, and in the process this will generate the data model class structure. 1. Install via the method described for your operating system [here](https://github.com/swagger-api/swagger-codegen#Prerequisites). Make sure to install a version after 3.0 that will support openapi 3. 2. Run swagger-codegen with the options in the example below. The URL references where the yaml for this documentation is stored on github. Make sure to replace CURRENT_VERSION with the correct version. (The current version is `0.1.7`.) To generate Java classes rather, change the `-l python` to `-l java`. Change the value to the `-o` option to the desired output location. ``` swagger-codegen generate -l python -o ./client -i https://raw.githubusercontent.com/ml4ai/automates-v2/master/docs/source/gromet_FN_v{CURRENT_VERSION}.yaml ``` 3. Once it executes, the client code will be generated at your specified location. For python, the classes will be located in `$OUTPUT_PATH/skema.gromet.fn.`. For java, they will be located in `$OUTPUT_PATH/src/main/java/io/swagger/client/model/` If generating GroMEt schema data model classes in SKEMA (AutoMATES), then after generating the above, follow the instructions here: ``` <automates>/automates/model_assembly/gromet/model/README.md ``` # noqa: E501

OpenAPI spec version: 0.1.9
OpenAPI spec version: 0.1.10
Contact: [email protected]
Generated by: https://github.com/swagger-api/swagger-codegen.git
"""
Expand All @@ -22,11 +22,12 @@
from skema.gromet.fn.gromet_fn import GrometFN
from skema.gromet.fn.gromet_fn_module import GrometFNModule
from skema.gromet.fn.gromet_fn_module_collection import GrometFNModuleCollection
from skema.gromet.fn.gromet_fn_module_dependency_reference import GrometFNModuleDependencyReference
from skema.gromet.fn.gromet_object import GrometObject
from skema.gromet.fn.gromet_port import GrometPort
from skema.gromet.fn.gromet_wire import GrometWire
from skema.gromet.fn.import_source_type import ImportSourceType
from skema.gromet.fn.import_type import ImportType
from skema.gromet.fn.literal_value import LiteralValue
# from skema.gromet.fn.metadata import Metadata
from skema.gromet.fn.metadata import Metadata
from skema.gromet.fn.typed_value import TypedValue
4 changes: 2 additions & 2 deletions skema/gromet/fn/function_type.py
Original file line number Diff line number Diff line change
Expand Up @@ -3,9 +3,9 @@
"""
Grounded Model Exchange (GroMEt) schema for Function Networks

This document defines the GroMEt Function Network data model. Note that Metadata is defined in separate spec. __Using Swagger to Generate Class Structure__ To automatically generate Python or Java models corresponding to this document, you can use [swagger-codegen](https://swagger.io/tools/swagger-codegen/). This can be used to generate the client code based off of this spec, and in the process this will generate the data model class structure. 1. Install via the method described for your operating system [here](https://github.com/swagger-api/swagger-codegen#Prerequisites). Make sure to install a version after 3.0 that will support openapi 3. 2. Run swagger-codegen with the options in the example below. The URL references where the yaml for this documentation is stored on github. Make sure to replace CURRENT_VERSION with the correct version. (The current version is `0.1.7`.) To generate Java classes rather, change the `-l python` to `-l java`. Change the value to the `-o` option to the desired output location. ``` swagger-codegen generate -l python -o ./client -i https://raw.githubusercontent.com/ml4ai/automates-v2/master/docs/source/gromet_FN_v{CURRENT_VERSION}.yaml ``` 3. Once it executes, the client code will be generated at your specified location. For python, the classes will be located in `$OUTPUT_PATH/swagger_client/models/`. For java, they will be located in `$OUTPUT_PATH/src/main/java/io/swagger/client/model/` If generating GroMEt schema data model classes in SKEMA (AutoMATES), then after generating the above, follow the instructions here: ``` <automates>/automates/model_assembly/gromet/model/README.md ``` # noqa: E501
This document defines the GroMEt Function Network data model. Note that Metadata is defined in separate spec. __Using Swagger to Generate Class Structure__ To automatically generate Python or Java models corresponding to this document, you can use [swagger-codegen](https://swagger.io/tools/swagger-codegen/). This can be used to generate the client code based off of this spec, and in the process this will generate the data model class structure. 1. Install via the method described for your operating system [here](https://github.com/swagger-api/swagger-codegen#Prerequisites). Make sure to install a version after 3.0 that will support openapi 3. 2. Run swagger-codegen with the options in the example below. The URL references where the yaml for this documentation is stored on github. Make sure to replace CURRENT_VERSION with the correct version. (The current version is `0.1.7`.) To generate Java classes rather, change the `-l python` to `-l java`. Change the value to the `-o` option to the desired output location. ``` swagger-codegen generate -l python -o ./client -i https://raw.githubusercontent.com/ml4ai/automates-v2/master/docs/source/gromet_FN_v{CURRENT_VERSION}.yaml ``` 3. Once it executes, the client code will be generated at your specified location. For python, the classes will be located in `$OUTPUT_PATH/skema.gromet.fn.`. For java, they will be located in `$OUTPUT_PATH/src/main/java/io/swagger/client/model/` If generating GroMEt schema data model classes in SKEMA (AutoMATES), then after generating the above, follow the instructions here: ``` <automates>/automates/model_assembly/gromet/model/README.md ``` # noqa: E501

OpenAPI spec version: 0.1.9
OpenAPI spec version: 0.1.10
Contact: [email protected]
Generated by: https://github.com/swagger-api/swagger-codegen.git
"""
Expand Down
4 changes: 2 additions & 2 deletions skema/gromet/fn/gromet_box.py
Original file line number Diff line number Diff line change
Expand Up @@ -3,9 +3,9 @@
"""
Grounded Model Exchange (GroMEt) schema for Function Networks

This document defines the GroMEt Function Network data model. Note that Metadata is defined in separate spec. __Using Swagger to Generate Class Structure__ To automatically generate Python or Java models corresponding to this document, you can use [swagger-codegen](https://swagger.io/tools/swagger-codegen/). This can be used to generate the client code based off of this spec, and in the process this will generate the data model class structure. 1. Install via the method described for your operating system [here](https://github.com/swagger-api/swagger-codegen#Prerequisites). Make sure to install a version after 3.0 that will support openapi 3. 2. Run swagger-codegen with the options in the example below. The URL references where the yaml for this documentation is stored on github. Make sure to replace CURRENT_VERSION with the correct version. (The current version is `0.1.7`.) To generate Java classes rather, change the `-l python` to `-l java`. Change the value to the `-o` option to the desired output location. ``` swagger-codegen generate -l python -o ./client -i https://raw.githubusercontent.com/ml4ai/automates-v2/master/docs/source/gromet_FN_v{CURRENT_VERSION}.yaml ``` 3. Once it executes, the client code will be generated at your specified location. For python, the classes will be located in `$OUTPUT_PATH/swagger_client/models/`. For java, they will be located in `$OUTPUT_PATH/src/main/java/io/swagger/client/model/` If generating GroMEt schema data model classes in SKEMA (AutoMATES), then after generating the above, follow the instructions here: ``` <automates>/automates/model_assembly/gromet/model/README.md ``` # noqa: E501
This document defines the GroMEt Function Network data model. Note that Metadata is defined in separate spec. __Using Swagger to Generate Class Structure__ To automatically generate Python or Java models corresponding to this document, you can use [swagger-codegen](https://swagger.io/tools/swagger-codegen/). This can be used to generate the client code based off of this spec, and in the process this will generate the data model class structure. 1. Install via the method described for your operating system [here](https://github.com/swagger-api/swagger-codegen#Prerequisites). Make sure to install a version after 3.0 that will support openapi 3. 2. Run swagger-codegen with the options in the example below. The URL references where the yaml for this documentation is stored on github. Make sure to replace CURRENT_VERSION with the correct version. (The current version is `0.1.7`.) To generate Java classes rather, change the `-l python` to `-l java`. Change the value to the `-o` option to the desired output location. ``` swagger-codegen generate -l python -o ./client -i https://raw.githubusercontent.com/ml4ai/automates-v2/master/docs/source/gromet_FN_v{CURRENT_VERSION}.yaml ``` 3. Once it executes, the client code will be generated at your specified location. For python, the classes will be located in `$OUTPUT_PATH/skema.gromet.fn.`. For java, they will be located in `$OUTPUT_PATH/src/main/java/io/swagger/client/model/` If generating GroMEt schema data model classes in SKEMA (AutoMATES), then after generating the above, follow the instructions here: ``` <automates>/automates/model_assembly/gromet/model/README.md ``` # noqa: E501

OpenAPI spec version: 0.1.9
OpenAPI spec version: 0.1.10
Contact: [email protected]
Generated by: https://github.com/swagger-api/swagger-codegen.git
"""
Expand Down
4 changes: 2 additions & 2 deletions skema/gromet/fn/gromet_box_conditional.py
Original file line number Diff line number Diff line change
Expand Up @@ -3,9 +3,9 @@
"""
Grounded Model Exchange (GroMEt) schema for Function Networks

This document defines the GroMEt Function Network data model. Note that Metadata is defined in separate spec. __Using Swagger to Generate Class Structure__ To automatically generate Python or Java models corresponding to this document, you can use [swagger-codegen](https://swagger.io/tools/swagger-codegen/). This can be used to generate the client code based off of this spec, and in the process this will generate the data model class structure. 1. Install via the method described for your operating system [here](https://github.com/swagger-api/swagger-codegen#Prerequisites). Make sure to install a version after 3.0 that will support openapi 3. 2. Run swagger-codegen with the options in the example below. The URL references where the yaml for this documentation is stored on github. Make sure to replace CURRENT_VERSION with the correct version. (The current version is `0.1.7`.) To generate Java classes rather, change the `-l python` to `-l java`. Change the value to the `-o` option to the desired output location. ``` swagger-codegen generate -l python -o ./client -i https://raw.githubusercontent.com/ml4ai/automates-v2/master/docs/source/gromet_FN_v{CURRENT_VERSION}.yaml ``` 3. Once it executes, the client code will be generated at your specified location. For python, the classes will be located in `$OUTPUT_PATH/swagger_client/models/`. For java, they will be located in `$OUTPUT_PATH/src/main/java/io/swagger/client/model/` If generating GroMEt schema data model classes in SKEMA (AutoMATES), then after generating the above, follow the instructions here: ``` <automates>/automates/model_assembly/gromet/model/README.md ``` # noqa: E501
This document defines the GroMEt Function Network data model. Note that Metadata is defined in separate spec. __Using Swagger to Generate Class Structure__ To automatically generate Python or Java models corresponding to this document, you can use [swagger-codegen](https://swagger.io/tools/swagger-codegen/). This can be used to generate the client code based off of this spec, and in the process this will generate the data model class structure. 1. Install via the method described for your operating system [here](https://github.com/swagger-api/swagger-codegen#Prerequisites). Make sure to install a version after 3.0 that will support openapi 3. 2. Run swagger-codegen with the options in the example below. The URL references where the yaml for this documentation is stored on github. Make sure to replace CURRENT_VERSION with the correct version. (The current version is `0.1.7`.) To generate Java classes rather, change the `-l python` to `-l java`. Change the value to the `-o` option to the desired output location. ``` swagger-codegen generate -l python -o ./client -i https://raw.githubusercontent.com/ml4ai/automates-v2/master/docs/source/gromet_FN_v{CURRENT_VERSION}.yaml ``` 3. Once it executes, the client code will be generated at your specified location. For python, the classes will be located in `$OUTPUT_PATH/skema.gromet.fn.`. For java, they will be located in `$OUTPUT_PATH/src/main/java/io/swagger/client/model/` If generating GroMEt schema data model classes in SKEMA (AutoMATES), then after generating the above, follow the instructions here: ``` <automates>/automates/model_assembly/gromet/model/README.md ``` # noqa: E501

OpenAPI spec version: 0.1.9
OpenAPI spec version: 0.1.10
Contact: [email protected]
Generated by: https://github.com/swagger-api/swagger-codegen.git
"""
Expand Down
4 changes: 2 additions & 2 deletions skema/gromet/fn/gromet_box_function.py
Original file line number Diff line number Diff line change
Expand Up @@ -3,9 +3,9 @@
"""
Grounded Model Exchange (GroMEt) schema for Function Networks

This document defines the GroMEt Function Network data model. Note that Metadata is defined in separate spec. __Using Swagger to Generate Class Structure__ To automatically generate Python or Java models corresponding to this document, you can use [swagger-codegen](https://swagger.io/tools/swagger-codegen/). This can be used to generate the client code based off of this spec, and in the process this will generate the data model class structure. 1. Install via the method described for your operating system [here](https://github.com/swagger-api/swagger-codegen#Prerequisites). Make sure to install a version after 3.0 that will support openapi 3. 2. Run swagger-codegen with the options in the example below. The URL references where the yaml for this documentation is stored on github. Make sure to replace CURRENT_VERSION with the correct version. (The current version is `0.1.7`.) To generate Java classes rather, change the `-l python` to `-l java`. Change the value to the `-o` option to the desired output location. ``` swagger-codegen generate -l python -o ./client -i https://raw.githubusercontent.com/ml4ai/automates-v2/master/docs/source/gromet_FN_v{CURRENT_VERSION}.yaml ``` 3. Once it executes, the client code will be generated at your specified location. For python, the classes will be located in `$OUTPUT_PATH/swagger_client/models/`. For java, they will be located in `$OUTPUT_PATH/src/main/java/io/swagger/client/model/` If generating GroMEt schema data model classes in SKEMA (AutoMATES), then after generating the above, follow the instructions here: ``` <automates>/automates/model_assembly/gromet/model/README.md ``` # noqa: E501
This document defines the GroMEt Function Network data model. Note that Metadata is defined in separate spec. __Using Swagger to Generate Class Structure__ To automatically generate Python or Java models corresponding to this document, you can use [swagger-codegen](https://swagger.io/tools/swagger-codegen/). This can be used to generate the client code based off of this spec, and in the process this will generate the data model class structure. 1. Install via the method described for your operating system [here](https://github.com/swagger-api/swagger-codegen#Prerequisites). Make sure to install a version after 3.0 that will support openapi 3. 2. Run swagger-codegen with the options in the example below. The URL references where the yaml for this documentation is stored on github. Make sure to replace CURRENT_VERSION with the correct version. (The current version is `0.1.7`.) To generate Java classes rather, change the `-l python` to `-l java`. Change the value to the `-o` option to the desired output location. ``` swagger-codegen generate -l python -o ./client -i https://raw.githubusercontent.com/ml4ai/automates-v2/master/docs/source/gromet_FN_v{CURRENT_VERSION}.yaml ``` 3. Once it executes, the client code will be generated at your specified location. For python, the classes will be located in `$OUTPUT_PATH/skema.gromet.fn.`. For java, they will be located in `$OUTPUT_PATH/src/main/java/io/swagger/client/model/` If generating GroMEt schema data model classes in SKEMA (AutoMATES), then after generating the above, follow the instructions here: ``` <automates>/automates/model_assembly/gromet/model/README.md ``` # noqa: E501

OpenAPI spec version: 0.1.9
OpenAPI spec version: 0.1.10
Contact: [email protected]
Generated by: https://github.com/swagger-api/swagger-codegen.git
"""
Expand Down
Loading
Loading