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@epnev epnev released this 23 Jan 03:51
v1.8
a1e3259
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Learn about vigilant mode.

Main features:

  • Introducing VolPy a new module for analysis of voltage imaging data. A description of the analysis pipeline can be found in this preprint. An application on a dataset courtesy of the Svoboda lab can be found in demos/general/demo_pipeline_voltage_imaging.py.
  • Introducing an additional algorithm for online analysis of 1p data, using a Ring-CNN based background model. An example is given in the notebook demos/notebooks/demo_ring_CNN.ipynb (GPU is required).

Other improvements:

  • An eccentricity based test for component screening.
  • Improved online analysis for 1p data (by fixing some bugs)
  • Ability to analyze online arbitrary HDF5/MATv7.3 files.
  • Ability to call merging directly from the estimates object.
  • Improved docs.

Special thanks to @caichangjia for his work in integrating VolPy with CaImAn.

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