Skip to content

v1.10.0
Compare
Choose a tag to compare
@EricThomson EricThomson released this 30 Jan 16:39
· 313 commits to main since this release
v1.10.0
4c2e377
This commit was created on GitHub.com and signed with GitHub’s verified signature.
GPG key ID: B5690EEEBB952194
Learn about vigilant mode.

Main changes for release 1.10.0

  • Major revision to CNMF notebook

    • Patch visualization function added to help choose spatial parameters
    • More discussion of save/load results (including saving results to csv)
    • Emphasize key parameters
    • Sidebars added, with links to new deeper dive in docs (e.g., memmapping)
    • Explicit discussion of how dfof is calculated
    • Images of workflows
    • Discussion of handling large movies, and types of movies we can handle
    • Fix dfof so it handles denoised traces
    • Discussion of model and its visualization

  • Major revision to CNMFE notebook

    • Discussion of ring model
    • Discussion of preprocessing filter and corr/pnr
    • Updated corr/pnr viewer and description of its use
    • Added visualization of bg noise

  • Switch from z5py library to zarr library

  • File format discussion added to docs

  • Check for parameter consistency added between rf and gSiz (thanks @kushalkolar)

Contributors

kushalkolar
Assets 2
Loading