Update main.yml #2
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| name: Deploy to shinyapps.io | |
| on: | |
| # run on any push | |
| push: | |
| # run on request (via button in actions menu) | |
| workflow_dispatch: | |
| jobs: | |
| deploy: | |
| name: Deploy to shinyapps | |
| # allow skipping deployment for commits containing '[automated]' or '[no-deploy]' in the commit message | |
| if: "!contains(github.event.head_commit.message, '[automated]') && !contains(github.event.head_commit.message, '[no-deploy]')" | |
| runs-on: ubuntu-latest | |
| steps: | |
| # Step 1: Check out the code from the repository | |
| - uses: actions/checkout@v2 | |
| - uses: r-lib/actions/setup-r@v2-branch | |
| # Step 2: Install the required Debian packages | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y librsvg2-dev | |
| sudo apt install cmake | |
| # Step 3: Verify that pkg-config can find the libraries | |
| - name: Verify pkg-config for librsvg | |
| run: | | |
| pkg-config --modversion librsvg-2.0 | |
| # Step 4: Install R packages | |
| - name: Install shiny | |
| run: | | |
| install.packages(c("shiny", | |
| "renv", | |
| "rsconnect", | |
| "rsvg", | |
| "shinycssloaders", | |
| "tidyverse", | |
| "svglite", | |
| "plotly", | |
| "ggcorrplot", | |
| "DT", | |
| "broom", | |
| "ggpp", | |
| "ggpubr", | |
| "gridExtra", | |
| "grid", | |
| "foreach", | |
| "shinyjs", | |
| "lubridate", | |
| "emojifont", | |
| "showtext", | |
| "patchwork", | |
| "IRkernel")) | |
| shell: Rscript {0} | |
| # Step 5: Deploy to shinyapps.io | |
| - name: Push to shiny.io | |
| run: | | |
| "rsconnect::setAccountInfo(name='easyeyes', token=${{secrets.TOKEN}}, secret=${{secrets.SECRET}})" | |
| "rsconnect::deployApp(appName = 'easyeyes_app')" | |
| shell: Rscript {0} | |