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Pull requests: CDCgov/pyrenew-hew

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Pull requests list

add wastewater data to pyrenew_hew_data
#315 by sbidari was closed Jan 31, 2025 • Draft
Improvements and bug fixes for epiweekly other hubverse tables and plots
#312 by dylanhmorris was merged Jan 28, 2025 Loading…
4
wastewater observation process
#310 by sbidari was merged Jan 29, 2025 Loading…
1
38
Cancel outdated CI workflows
#309 by dylanhmorris was merged Jan 23, 2025 Loading…
3
Update hubverse_create_table so that it is possible to mix epiweekly and daily other ed visit forecasts by location
#307 by dylanhmorris was merged Jan 23, 2025 Loading…
3
Make right truncation offset in forecast data None rather than 0
#305 by dylanhmorris was merged Jan 23, 2025 Loading…
4
Update delete-container-tag.yaml
#304 by gvegayon was merged Jan 22, 2025 Loading…
1
Refactoring container build to use CDCgov/cfa-actions/twostep-container-build
#302 by gvegayon was merged Jan 22, 2025 Loading…
6
add setup-r
#295 by sbidari was merged Jan 15, 2025 Loading…
1
2
(Do not merge) branch for running Pyrenew-H prior to model standardization
#289 by dylanhmorris was closed Jan 9, 2025 • Draft
1
Make default pyrenew in container v.0.1.2
#285 by dylanhmorris was merged Jan 8, 2025 Loading…
1
(Do not merge) temporary branch for running pyrenew-H
#284 by dylanhmorris was closed Jan 9, 2025 • Draft
1
Add helper data PyrenewHEWData class to hold input data to PyrenewHewModels
#283 by dylanhmorris was merged Jan 18, 2025 Loading…
38
add subpopulation to LatentInfectionProcess
#282 by sbidari was merged Jan 17, 2025 Loading…
1
19
Point at prod_priors.py in end-to-end test
#279 by dylanhmorris was merged Jan 7, 2025 Loading…
1
2
Modularize model in preparation for fitting real NHSN data
#277 by dylanhmorris was merged Jan 7, 2025 Loading…
5
Remove time column from output
#276 by damonbayer was merged Jan 7, 2025 Loading…
2
Create combined epiweekly data
#274 by damonbayer was merged Jan 7, 2025 Loading…
2 tasks
1
Save combined NHSN + NSSP eval data
#272 by damonbayer was merged Jan 3, 2025 Loading…
2
Update location of latest_comprehensive.parquet
#271 by damonbayer was merged Jan 3, 2025 Loading…
1
1
add epiweekly other forecast samples to standard pipeline
#270 by dylanhmorris was merged Jan 4, 2025 Loading…
27
Use an API key ID and secret for NHSN in pipeline-run-check.yaml
#269 by dylanhmorris was merged Dec 29, 2024 Loading…
1
add codecov status badge to readme
#268 by sbidari was merged Dec 27, 2024 Loading…
3
fix json keys in data_for_model_fit
#267 by damonbayer was merged Dec 23, 2024 Loading…
1
hotfix prep_data.py
#266 by dylanhmorris was merged Dec 23, 2024 Loading…
6
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