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Third party registry setup #8

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Feb 8, 2024
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2 changes: 1 addition & 1 deletion R/code.R
Original file line number Diff line number Diff line change
Expand Up @@ -77,7 +77,7 @@ new_code_plot_block <- function(data, ...) {
eval()
}),
...,
class = c("code_transform_block", "plot_block", "submit_block")
class = c("code_plot_block", "plot_block", "submit_block")
)
}

Expand Down
49 changes: 34 additions & 15 deletions R/demo-bms-blocks.R
Original file line number Diff line number Diff line change
Expand Up @@ -123,7 +123,7 @@ new_plot_block <- function(
)
}),
...,
class = c("plot_block")
class = c("plot_block", "submit_block")
)
}

Expand Down Expand Up @@ -281,7 +281,7 @@ new_ggiraph_block <- function(
)
}),
...,
class = c("ggiraph_block", "plot_block")
class = c("ggiraph_block", "plot_block", "submit_block")
)
}

Expand Down Expand Up @@ -354,31 +354,41 @@ asfactor_block <- function(data, ...) {
initialize_block(new_asfactor_block(data, ...), data)
}

#' @rdname demo_block
#' @export
lab_data_block <- function(...) {
initialize_block(new_data_block(
...,
dat = as.environment("package:blockr.data"),
selected = "lab"
))
}

#' @rdname demo_block
#' @export
demo_data_block <- function(...) {
initialize_block(
new_data_block(
...,
dat = as.environment("package:blockr.data"),
selected = "lab"
)
)
initialize_block(new_data_block(
...,
dat = as.environment("package:blockr.data"),
selected = "demo"
))
}

#' @rdname demo_block
#' @export
demo_join_block <- function(data, ...) {
initialize_block(
blk <- initialize_block(
new_join_block(
data,
y = "demo",
type = "inner",
by_col = c("STUDYID", "USUBJID"),
by = c("STUDYID", "USUBJID"),
...
),
data
)
class(blk) <- class(blk)[-3]
blk$submit <- NULL
blk
}

#' @rdname demo_block
Expand All @@ -404,7 +414,7 @@ demo_group_by_block <- function(data, ...) {
#' @rdname demo_block
#' @export
demo_filter_block_1 <- function(data, ...) {
initialize_block(
blk <- initialize_block(
new_filter_block(
data,
columns = "LBTEST",
Expand All @@ -413,12 +423,15 @@ demo_filter_block_1 <- function(data, ...) {
),
data
)
class(blk) <- class(blk)[-3]
blk$submit <- NULL
blk
}

#' @rdname demo_block
#' @export
demo_filter_block_2 <- function(data, ...) {
initialize_block(
blk <- initialize_block(
new_filter_block(
data,
columns = "VISIT",
Expand All @@ -428,17 +441,23 @@ demo_filter_block_2 <- function(data, ...) {
),
data
)
class(blk) <- class(blk)[-3]
blk$submit <- NULL
blk
}

#' @rdname demo_block
#' @export
demo_summarize_block <- function(data, ...) {
initialize_block(
blk <- initialize_block(
new_summarize_block(
data,
default_columns = c("LBSTRESN", "LBSTRESN"),
...
),
data
)
class(blk) <- class(blk)[-3]
blk$submit <- NULL
blk
}
119 changes: 119 additions & 0 deletions R/utils.R
Original file line number Diff line number Diff line change
Expand Up @@ -32,3 +32,122 @@ ui_fields_one_column <- function(x, ns, inputs_hidden) {
div(cards, class = "mt-3")
)
}

register_blockr_extra_blocks <- function(pkg) {

if (missing(pkg)) {
pkg <- pkg_name()
}

register_blocks(
constructor = c(
plot_block,
ggiraph_block,
asfactor_block,
lab_data_block,
demo_data_block,
demo_join_block,
demo_arrange_block,
demo_group_by_block,
demo_filter_block_1,
demo_filter_block_2,
demo_summarize_block,
admiral_dpc_block,
filter_expr_block,
summarize_expr_block,
code_transform_block,
code_plot_block
),
name = c(
"plot block",
"ggiraph block",
"asfactor block",
"lab data_block",
"demo data block",
"demo join block",
"demo arrange block",
"demo group by block",
"demo filter block 1",
"demo filter block 2",
"demo summarize block",
"admiral dpc block",
"filter expr block",
"summarize expr block",
"code transform block",
"code plot block"
),
description = c(
"Monolithic ggplot block",
"Monolithic ggiraph block",
"As factor mutate block",
"blockr.data preselected to lab data",
"blockr.data preselected to demo data",
"Predefined join block for BMS demo",
"Predefined arrange block for BMS demo",
"Predefined group by block for BMS demo",
"Predefined filter block for BMS demo 1",
"Predefined filter block for BMS demo 2",
"Predefined summarize block for BMS demo",
"Admiral block",
"Filter expr block",
"Summarize expr block",
"Code transform block",
"Code plot block"
),
classes = list(
c("plot_block", "submit_block"),
c("ggiraph_block", "plot_block", "submit_block"),
c("asfactor_block", "transform_block"),
c("lab_dataset_block", "data_block"),
c("demo_dataset_block", "data_block"),
c("demo_join_block", "transform_block", "submit_block"),
c("demo_arrange_block", "transform_block"),
c("demo_group_by_block", "transform_block"),
c("demo_filter_block_1", "transform_block", "submit_block"),
c("demo_filter_block_2", "transform_block", "submit_block"),
c("demo_summarize_block", "transform_block", "submit_block"),
c("admiral_dpc_block", "transform_block"),
c("filter_expr_block", "transform_block"),
c("summarize_expr_block", "transform_block"),
c("code_transform_block", "transform_block", "submit_block"),
c("code_plot_block", "plot_block", "submit_block")
),
input = c(
"data.frame",
"data.frame",
"data.frame",
NA_character_,
NA_character_,
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame"
),
output = c(
"list",
"list",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame",
"data.frame"
),
package = pkg
)
}
6 changes: 6 additions & 0 deletions R/zzz.R
Original file line number Diff line number Diff line change
@@ -0,0 +1,6 @@
.onLoad <- function(libname, pkgname) { # nocov start

register_blockr_extra_blocks(pkgname)

invisible(NULL)
} # nocov end
26 changes: 14 additions & 12 deletions inst/examples/bms-demo-cdisc/app.R
Original file line number Diff line number Diff line change
Expand Up @@ -6,16 +6,18 @@ library(ggiraph)

# Note: sometimes memories issue due to the join block
# can be solved by restarting R between each run.

stack <- new_stack(
demo_data_block,
demo_join_block,
demo_filter_block_1,
demo_filter_block_2,
demo_arrange_block,
asfactor_block,
demo_group_by_block,
demo_summarize_block,
ggiraph_block
serve_workspace(
stack1 = new_stack(lab_data_block, head_block),
stack2 = new_stack(demo_data_block, demo_join_block),
stack3 = new_stack(
result_block,
demo_filter_block_1,
demo_filter_block_2#,
#demo_arrange_block,
#asfactor_block#,
#demo_group_by_block,
#demo_summarize_block,
#ggiraph_block
),
title = "My workspace"
)
serve_stack(stack)
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