Installation instructions

####Installation of Morpho

Installation of the R-package Morpho (latest release):

0. Make sure to work with the latest version of R and install dependencies (type the following commands into your R terminal):

   install.packages(c("rgl", "Rvcg","doParallel","colorRamps","yaImpute","RcppArmadillo"))

Also required are the packages 'Matrix' and 'parallel' which usually are already installed as R's recommended packages.

• Download the version suitable for your OS sourceforge or github. Either the compiled package (for Windows and OS X) or the source tarball (Linux).

• Installation command from within R:

    install.packages("Path_to_downloaded_package_Morpho\[Version_OS\]",repos=NULL)
  

•  check if the package can be loaded:
    
    load package: library(Morpho)
  

Installation of the R-package Morpho (latest development code) using devtools:

1. install devtools from within R (Ubuntu/Debian users will have to install libcurl4-gnutls-dev beforehand):

    install.packages("devtools")
   

2. Install build environment

   • Windows: Install latest version of Rtools During installation of Rtools make sure to install the toolchain, and to select "Edit the system path" (and confirming the installers suggestions).
   • OSX: Install XCODE and gfortran
   • Ubuntu/Debian: make sure you have package r-base-dev installed.

3. In R run the command:

    require(devtools)
    install_github("zarquon42b/Morpho")