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Chimera Vsearch
Yoann Dufresne edited this page Jul 11, 2017
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This module use the uchime module of the Vsearch tool to filter the chimeras from an FASTA file. For now, only the de novo version is available through the web server.
- Input file: The FASTA containing all the sequences to filter.
- Filtered file: The file without chimeras that will be outputted.
- Chimeras: If not empty, the chimeras will be outputted in this file.
- Vsearch github: https://github.com/torognes/vsearch
- Original publication: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3150044/