Skip to content

This repository contains code to perform the analyses and modeling described in our paper

Notifications You must be signed in to change notification settings

willright28/Tibet-mammals-and-birds

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

6 Commits
 
 
 
 
 
 

Repository files navigation

Code and data for 'Alpine burrow-sharing mammals and birds show similar population-level climate change risks'

DATA & FILE OVERVIEW

  1. We used three species in our study.

  2. data.zip contains location records used in ecological niche models and climate data used in genotype-environment association.

  3. code.zip contains 6 R scripts for relevant analyses, including:

    • R-script-for-GEBVs.R

    • R-script-for-genotype-climate-associstions.R

    • R-script-for-GF.R

    • R-script-for-GDM.R

    • R-script-for-ENM.R

    • R-script-for-landscape-connectivity.R

  4. The version of R software and how to install them can be found on each script. R version 4.1.0 was used to conduct all R analyses.

SPECIFIC INFORMATION FOR: data.zip

  1. Tibet_species_locations.csv: location records used in ecological niche models, variables information is described as following. Species: species' scientific name x: longitude y: latitude

  2. Tibet_species_env.csv: 3 bioclimatic variables were used in our study, the first two columns are species' scientific name and samples ID, and the rest columns are the 3 bioclimatic variables. Species: species' scientific name ID: samples ID bio5: Max Temperature of Warmest Month bio6: Min Temperature of Coldest Month bio15: Precipitation Seasonality (Coefficient of Variation)

About

This repository contains code to perform the analyses and modeling described in our paper

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published