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NishiPhalke
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package krews.file | ||
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data class GeoInputFile(val sraaccession: String, override val path: String, val dockerimage: String? = "ncbi/sra-tools") : InputFile() { | ||
override fun downloadFileImage() = "$dockerimage" | ||
override fun downloadFileCommand(containerBaseDir: String) = "fasterq-dump --outfile $containerBaseDir/$path -e 8 -p $sraaccession" | ||
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} |