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druid Public
Forked from apache/druidApache Druid: a high performance real-time analytics database.
Java Apache License 2.0 UpdatedJan 25, 2025 -
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letterlift Public
Bootstrap website for LetterLift, as a GitHub project page.
HTML MIT License UpdatedJun 25, 2024 -
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druid-website-src Public
Forked from apache/druid-website-srcApache Druid website src
HTML UpdatedJan 10, 2024 -
advent2021 Public
Advent of Code, https://adventofcode.com/
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plot_potential Public
Plot individual potential functions that comprise force fields. Ideal for presentations. Includes energy terms for bonds (harmonic), angles (harmonic), proper torsion (periodic cosine), improper to…
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patfam Public
Web app to determine whether patent applications from different jurisdictions (USPTO, EPO, WIPO, etc.) are of the same family.
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mismatch Public
Web app to find mismatched base pairs between hybridized DNA sequences.
HTML GNU General Public License v3.0 UpdatedFeb 20, 2021 -
textsmoosh Public
Web app to process and combine multi-line text into a single line
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d3-flask-blog-post Public
Forked from benalexkeen/d3-flask-blog-postBlog post on using D3 with flask
HTML UpdatedJan 19, 2021 -
permeability Public
Adaptive biasing force (ABF) & umbrella sampling (US) simulations to calculate membrane permeability
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misc Public
Miscellaneous scripts for research and data analysis using Python, OpenEye Python Toolkit, VMD/Tcl, or Grace.
Python UpdatedMay 1, 2020 -
stock-market Public
Exploratory analysis of stock market data in R.
R MIT License UpdatedApr 25, 2020 -
uci-thesis-latex Public
Forked from lotten/uci-thesis-latexLaTeX template for thesis and dissertation documents at UC Irvine
TeX UpdatedMar 19, 2020 -
GLIC Public
Scripts for fitting GLIC receptor to cryo-EM densities
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dihedral-scan Public
Compute dihedral scan in some molecule, such as to compare an MM force field to QM results.
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Hv1 Public
Free energy perturbation calculations for Hv1 protein
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alchemlyb Public
Forked from alchemistry/alchemlybthe simple alchemistry library
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 20, 2019 -
alchemtest Public
Forked from alchemistry/alchemtestthe simple alchemistry test set
Python BSD 3-Clause "New" or "Revised" License UpdatedFeb 21, 2019 -
off_psi4 Public
Quanformer is a Python-based pipeline for generating conformers, preparing quantum mechanical (QM) calculations, and processing QM results for a set of molecules and their conformers. *** This repo…
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drug-computing Public
Forked from MobleyLab/drug-computingEducational materials for, and related to, UC Irvine's Drug Discovery Computing Techniques course (PharmSci 175/275), currently taught by David Mobley.
Jupyter Notebook Creative Commons Attribution 4.0 International UpdatedJan 18, 2018 -
TurbomoleScripts Public
Forked from magee256/TurbomoleScriptsAll scripts I've written for interacting with the quantum mechanical calculation package Turbomole
Python MIT License UpdatedNov 18, 2017 -
sdsc-summer-institute-2017 Public
Forked from sdsc/sdsc-summer-institute-2017SDSC Summer Institute 2017 teaching material
HTML UpdatedAug 10, 2017 -
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open-forcefield-data Public
Forked from openforcefield/open-forcefield-dataDatasets for open forcefield parameterization and development
Python UpdatedJun 24, 2016