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Merge pull request #646 from VChristiaens/master #391

Merge pull request #646 from VChristiaens/master

Merge pull request #646 from VChristiaens/master #391

Workflow file for this run

# This workflow will install Python depe:ndencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
name: ci
on: [push, pull_request]
jobs:
no_object_checks:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11"]
group: [1, 2, 3]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install pre-commit pytest pytest-cov sphinx
pip install -r requirements-dev.txt
# Uncomment below when ready to deal with a lot of PEP8 formatting changes
# - name: Verify files with pre-commit
# run: |
# # Setup pre-commit hooks
# pre-commit clean
# pre-commit install --hook-type pre-merge-commit
# pre-commit install --hook-type pre-push
# pre-commit install --hook-type post-rewrite
# pre-commit install-hooks
# pre-commit install
# # Run pre-commit hooks
# pre-commit run --files vip_hci/config/*.py
# pre-commit run --files vip_hci/fits/*.py
# pre-commit run --files vip_hci/fm/*.py
# pre-commit run --files vip_hci/greedy/*.py
# pre-commit run --files vip_hci/invprob/*.py
# pre-commit run --files vip_hci/metrics/*.py
# pre-commit run --files vip_hci/preproc/*.py
# pre-commit run --files vip_hci/psfsub/*.py
# pre-commit run --files vip_hci/stats/*.py
# pre-commit run --files vip_hci/var/*.py
- name: Test with pytest
run: |
pytest tests/pre_3_10 --cov=vip_hci/ --cov-report=xml --splits 3 --group ${{ matrix.group }}
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v3
objects_check:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ["3.10", "3.11"]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install pre-commit pytest pytest-cov sphinx
pip install -r requirements-dev.txt
# - name: Verify files with pre-commit
# run: |
# # Setup pre-commit hooks
# pre-commit clean
# pre-commit install --hook-type pre-merge-commit
# pre-commit install --hook-type pre-push
# pre-commit install --hook-type post-rewrite
# pre-commit install-hooks
# pre-commit install
# # Run pre-commit hooks
# pre-commit run --files vip_hci/objects/*.py
- name: Test with pytest
run: |
pytest tests/post_3_10 --cov=vip_hci/objects/ --cov-report=xml
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v3