Pinned Loading

1. deeptools/deepTools deeptools/deepTools Public

   Tools to process and analyze deep sequencing data.

   Python 679 212

2. deeptools/HiCExplorer deeptools/HiCExplorer Public

   HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.

   Python 233 70

3. maxplanck-ie/snakepipes maxplanck-ie/snakepipes Public

   Customizable workflows based on snakemake and python for the analysis of NGS data

   Python 384 86

4. deeptools/pyGenomeTracks deeptools/pyGenomeTracks Public

   python module to plot beautiful and highly customizable genome browser tracks

   Python 769 111

5. Subread_to_DEXSeq Subread_to_DEXSeq Public

   Scripts to import your FeatureCounts output into DEXSeq

   Python 30 21

6. bhardwaj-lab/sincei bhardwaj-lab/sincei Public

   A user-friendly toolkit for QC, counting, clustering and plotting of single-cell (epi)genomics data

   Python 6