Rollback to using /scratch on dragen tools now that we have tmpdirmin…

… set

Dockerfile

@@ -7,8 +7,8 @@ ARG GITHUB_ACTIONS_GROUP_NAME="docker"
 ARG GITHUB_ACTIONS_GROUP_ID="121"
 ARG CONDA_ENV_NAME="cwl-ica"
 ARG YQ_VERSION="v4.35.2"
-ARG ICAV2_CLI_VERSION="2.26.0"
-ARG ICAV2_PLUGINS_CLI_VERSION="v2.27.0.dev20240627150621"
+ARG ICAV2_CLI_VERSION="2.27.0"
+ARG ICAV2_PLUGINS_CLI_VERSION="v2.27.1"
 ARG ICAV2_PLUGINS_CLI_CONDA_PYTHON_VERSION="3.12"
 ARG ICAV2_PLUGINS_CLI_CONDA_ENV_NAME="python3.12"
 ARG CWL_UTILS_REPO_PATH="https://github.com/alexiswl/cwl-utils"

pyproject.toml

@@ -38,7 +38,7 @@ dependencies = [
   "semantic_version >= 2.10.0, < 3",
   "verboselogs >= 1.7, < 2",
   "websocket_client >= 1.7.0, < 2",
-  "wrapica >= 2.27.0.dev20240627145713",
+  "wrapica >= 2.27.1",
   "cwltool"  # Always the latest version
 ]
 

src/cwl_ica/utils/globals.py

@@ -199,7 +199,7 @@
 
 ICAV2_DRAGEN_TEMPSPACE_MAPPINGS = {
     "v1": "\"/ephemeral/\"",
-    "v2": "\"/tmp/\""
+    "v2": "\"/scratch/\""
 }
 
 MATCH_RUN_LINE_REGEX_OBJ = re.compile(r"run: (/)?([^/\0]+(/)?)+$")