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| Original file line number | Diff line number | Diff line change |
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| @@ -1,141 +1,129 @@ | ||
| ## Release summary | ||
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| Fairly major update. We tried to limit the disruption as much as possible, | ||
| but this introduces a few breaking changes that are documented in the NEWS file. | ||
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| Maintainers have been notified twice: a month ago and a week ago. | ||
| We confirmed that all changes were deliberate (either bug fixes or deliberate API changes) and provided guidance on how to update existing code | ||
| Minor release | ||
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| ## Test environments | ||
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| * local mac OS install, R 3.5.0 | ||
| * ubuntu 14.04 (on travis-ci), R-devel, R 3.5.2, R 3.4.4, R 3.3.3, R 3.2.5, R 3.1.3. | ||
| * mac OS 10.3.3 (on travis-ci) R 3.5.2 | ||
| * local mac OS install, R 3.6.0 | ||
| * ubuntu 14.04 (on travis-ci), R-devel, R 3.6.0, R 3.5.2, R 3.4.4, R 3.3.3, R 3.2.5. | ||
| * mac OS 10.3.3 (on travis-ci) R 3.6.0 | ||
| * win-builder (devel) | ||
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| ## R CMD check results | ||
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| 0 ERRORs | 0 WARNINGs | 1 NOTE | ||
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| * checking installed package size ... | ||
| installed size is 6.3Mb | ||
| sub-directories of 1Mb or more: | ||
| R 2.1Mb | ||
| libs 2.4Mb | ||
| * installed size is 8.3Mb | ||
| sub-directories of 1Mb or more: | ||
| libs 6.1Mb | ||
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| ## revdepcheck results | ||
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| We checked 1509 reverse dependencies (1379 from CRAN + 130 from BioConductor), comparing R CMD check results across CRAN and dev versions of this package. | ||
| We checked 1647 reverse dependencies (1485 from CRAN + 162 from BioConductor), comparing R CMD check results across CRAN and dev versions of this package. | ||
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| * We saw 40 new problems | ||
| * We failed to check 46 packages | ||
| * We saw 7 new problems | ||
| * We failed to check 77 packages | ||
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| Issues with CRAN packages are summarised below. | ||
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| ### New problems | ||
| (This reports the first line of each new failure) | ||
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| * alphavantager: API rate limit issue | ||
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| * bupaR | ||
| * dplyr.teradata | ||
| * dtplyr | ||
| * tidygraph | ||
| S3 generic/method consistency: sample_n() gained ... | ||
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| * desctable | ||
| code/documentation mismatches ... group_by() gained .drop= | ||
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| * zFactor | ||
| * visdat | ||
| * heemod: | ||
| * naniar: Needs to import dplyr::n() | ||
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| * cytominer: related to failures from dbplyr | ||
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| * ggmap: NOTE, sub directory data/ > 1Mb | ||
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| * portalr: test relies on digest()ing a data frame, probably related to changes in internals of grouped data frames | ||
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| * postal: IO problem, probably unrelated | ||
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| * purrrlyr: Work is being done in the dev version | ||
| ## Not correctly importing dplyr::group_by | ||
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| * simTool: test uses internal format of grouped tibbles, which has changed. PR sent. | ||
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| * tibbletime: test problem. PR sent. | ||
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| * treeplyr: The package uses internal details. PR sent. | ||
| Cardinal | ||
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| * tsibble: Fixed in the dev version | ||
| * vqtl: Fixed in the dev version | ||
| * modeldb: Fixed in the dev version | ||
| * rPref: Fixed in the dev version | ||
| * ruler: Fixed in the dev version | ||
| * dbplyr: fixed in dev version | ||
| * lmeresampler: Fixed in dev version | ||
| * ggfan: Fixed in dev version | ||
| ## Not sure what the problem is | ||
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| * dexter: Fails to build the vignette, not sure why | ||
| CluMP, INDperform, InjurySeverityScore, MonetDBLite | ||
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| * processcheckR: needs an update of the bupaR package | ||
| * edeaR: needs an update of the bupaR package | ||
| ## test bug | ||
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| * ezsummary: Needs to use api instead of attributes. PR sent. | ||
| compareDF, ruler | ||
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| * gravity: Does not correctly use tidyeval, PR sent. | ||
| ## colwixe issue | ||
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| * poplite: Not sure what the problem is. | ||
| spdplyr | ||
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| * corrr: Not sure what the problem is. Issue sent. | ||
| ## Fixed in dev version | ||
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| * safetyGraphics: Should use `.` instead of `.data$.` PR sent. | ||
| strapgod | ||
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| ### Failed to check | ||
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| * anomalyDetection (failed to install) | ||
| * arkdb (check timed out) | ||
| * bsam (failed to install) | ||
| * circumplex (failed to install) | ||
| * clustermq (check timed out) | ||
| * CollapsABEL (failed to install) | ||
| * colorednoise (failed to install) | ||
| * DepthProc (failed to install) | ||
| * DiversityOccupancy (failed to install) | ||
| * dynfrail (failed to install) | ||
| * easyformatr (failed to install) | ||
| * fastLink (failed to install) | ||
| * FSelectorRcpp (failed to install) | ||
| * graphicalVAR (failed to install) | ||
| * harrietr (failed to install) | ||
| * heatwaveR (failed to install) | ||
| * HTSSIP (check timed out) | ||
| * idefix (failed to install) | ||
| * ijtiff (failed to install) | ||
| * iRF (failed to install) | ||
| * lilikoi (failed to install) | ||
| * LLSR (failed to install) | ||
| * lpirfs (failed to install) | ||
| * mapfuser (failed to install) | ||
| * mbgraphic (failed to install) | ||
| * miceFast (failed to install) | ||
| * MonetDBLite (check timed out) | ||
| * morse (failed to install) | ||
| * petro.One (failed to install) | ||
| * phase1PRMD (failed to install) | ||
| * pmc (check timed out) | ||
| * poppr (failed to install) | ||
| * qdap (failed to install) | ||
| * Rdrools (failed to install) | ||
| * rmcfs (failed to install) | ||
| * rpcdsearch (failed to install) | ||
| * RtutoR (failed to install) | ||
| * segclust2d (failed to install) | ||
| * sf (failed to install) | ||
| * simputation (failed to install) | ||
| * textmining (failed to install) | ||
| * vapour (failed to install) | ||
| * vlad (failed to install) | ||
| * wand (failed to install) | ||
| * weibulltools (failed to install) | ||
| * windfarmGA (failed to install) | ||
| * ACDm | ||
| * ADMMsigma | ||
| * airGR | ||
| * BAS | ||
| * BMTME | ||
| * BradleyTerryScalable | ||
| * brunnermunzel | ||
| * bsam | ||
| * CaseBasedReasoning | ||
| * CB2 | ||
| * circumplex | ||
| * classyfireR | ||
| * CollapsABEL | ||
| * colorednoise | ||
| * Countr | ||
| * cpr | ||
| * crawl | ||
| * DataVisualizations | ||
| * DepthProc | ||
| * dialr | ||
| * DiversityOccupancy | ||
| * dtwclust | ||
| * dynfrail | ||
| * exuber | ||
| * fastLink | ||
| * fourierin | ||
| * FSelectorRcpp | ||
| * GenomicMating | ||
| * goldi | ||
| * graphicalVAR | ||
| * heatwaveR | ||
| * idefix | ||
| * ijtiff | ||
| * iRF | ||
| * lilikoi | ||
| * LLSR | ||
| * lpirfs | ||
| * mbgraphic | ||
| * miceFast | ||
| * mleap | ||
| * momentuHMM | ||
| * MonetDBLite | ||
| * morse | ||
| * mrgsolve | ||
| * nlmixr | ||
| * openair | ||
| * pccc | ||
| * petro.One | ||
| * phase1PRMD | ||
| * phenofit | ||
| * poppr | ||
| * PPforest | ||
| * qdap | ||
| * quanteda | ||
| * quokar | ||
| * qwraps2 | ||
| * Rdrools | ||
| * resautonet | ||
| * rmcfs | ||
| * rpcdsearch | ||
| * RSSL | ||
| * RtutoR | ||
| * RxODE | ||
| * sarima | ||
| * scanstatistics | ||
| * SCPME | ||
| * sf | ||
| * simputation | ||
| * SpaCCr | ||
| * telefit | ||
| * textmining | ||
| * vapour | ||
| * VarSelLCM | ||
| * vlad | ||
| * walker | ||
| * wand | ||
| * weibulltools |