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src/multigrate/model/_multivae.py

@@ -7,6 +7,7 @@
 import scipy
 import torch
 from matplotlib import pyplot as plt
+from pytorch_lightning.callbacks import ModelCheckpoint
 from scvi import REGISTRY_KEYS
 from scvi.data import AnnDataManager, fields
 from scvi.data._constants import _MODEL_NAME_KEY, _SETUP_ARGS_KEY
@@ -17,7 +18,6 @@
 from scvi.model.base._utils import _initialize_model
 from scvi.train import AdversarialTrainingPlan, TrainRunner
 from scvi.train._callbacks import SaveBestState
-from pytorch_lightning.callbacks import ModelCheckpoint
 
 from ..dataloaders import GroupDataSplitter
 from ..module import MultiVAETorch
@@ -292,16 +292,19 @@ def train(
 
         if save_checkpoint_every_n_epochs is not None:
             if path_to_checkpoints is not None:
-                kwargs["callbacks"].append(ModelCheckpoint(
-                    dirpath = path_to_checkpoints,
-                    save_top_k = -1,
-                    monitor = 'epoch',
-                    every_n_epochs = save_checkpoint_every_n_epochs,
-                    verbose = True,
-                ))
+                kwargs["callbacks"].append(
+                    ModelCheckpoint(
+                        dirpath=path_to_checkpoints,
+                        save_top_k=-1,
+                        monitor="epoch",
+                        every_n_epochs=save_checkpoint_every_n_epochs,
+                        verbose=True,
+                    )
+                )
             else:
-                raise ValueError(f"`save_checkpoint_every_n_epochs` = {save_checkpoint_every_n_epochs} so `path_to_checkpoints` has to be not None but is {path_to_checkpoints}.")
-
+                raise ValueError(
+                    f"`save_checkpoint_every_n_epochs` = {save_checkpoint_every_n_epochs} so `path_to_checkpoints` has to be not None but is {path_to_checkpoints}."
+                )
 
         if self.group_column is not None:
             data_splitter = GroupDataSplitter(