OHDSI Tool ATLAS

Verify Install

Introductory Tutorials

https://ohdsi.org/ohdsi2022-tutorial/

https://ohdsi.org/open-source-tutorials/

Practice with use cases

Discuss OHDSI tool among team with specific relevance to Integrating SCCRIP Data in OMOP format.

From https://ohdsi.org/software-tools/ below ATLAS is a free, publicly available, web-based tool developed by the OHDSI community that facilitates the design and execution of analyses on standardized, patient-level, observational data in the CDM format. ATLAS is deployed as a web application in combination with the OHDSI WebAPI. Performing real-time analyses requires access to the patient-level data in the CDM and is therefore typically installed behind an organization’s firewall. However, there is a public ATLAS, and although this ATLAS instance only has access to a few small simulated datasets, it can still be used for many purposes including testing and training. It is even possible to fully define an effect estimation or prediction study using the public instance of ATLAS, and automatically generate the R code for executing the study. That code can then be run in any environment with an available CDM without needing to install ATLAS and the WebAPI.

ATLAS LINKS

Documentation: Book of OHDSI • ATLAS Wiki (includes YouTube tutorials)

Demo: Click Here

Installation Information: Click Here

Source Code: GitHub

“10-Minute Tutorial” Video on Creating Cohort Definitions in ATLAS: Click Here