martin-steinegger
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31 Mar 11:28
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Plass & Penguin Release Notes
First release of Penguin, a metagenomic assembler that assembles DNA/RNA through a novel greedy AA/DNA-hybrid bayesian overlap extension strategy.
New Features and Enhancements
- First release of Penguin: We generate now two binaries,
plass
andpenguin
. Plass assembles protein sequences from DNA while Penguin assembles DNA contigs. Penguin comes in two variantspenguin guided_nuclassemble
, which first assembles using AA six-framed-translated overlaps and then further assemble the contigs using nucleotide information and a pure nucleotide assemblerpenguin nuclassemble
. - Compatibility and Portability: Thanks to simde Plass and Penguin now run on ARM (including Apple Silicon) and POWERPC.