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Update helix optimization tools #154

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Update helix optimization tools #154

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Commits on Aug 24, 2022

  1. add option for non-alternating triangle orientations in helix optimiz… 

    …ation
    @cwalker7
    cwalker7 committed Aug 24, 2022
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Commits on Sep 9, 2022

  1. major update to 2sc, 3sc helix optimization

    @cwalker7
    cwalker7 committed Sep 9, 2022
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Commits on Nov 2, 2022

  1. add native sequence optimization and tests

    @cwalker7
    cwalker7 committed Nov 2, 2022
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  2. add more bond constraint options for 1sc helix opt

    @cwalker7
    cwalker7 committed Nov 2, 2022
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  3. fix 3sc helix file name in tests

    @cwalker7
    cwalker7 committed Nov 2, 2022
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  4. fix typo in test_energy_eval

    @cwalker7
    cwalker7 committed Nov 2, 2022
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Commits on Dec 6, 2022

  1. 3sc helix opt with no backbone constraints, option for LJ bb-sc dista… 

    …nces in 1sc helices
    @cwalker7
    cwalker7 committed Dec 6, 2022
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