Backport PR #2185 on branch 1.0.x (Fix references page) #5043

	# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
	# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

	name: scvi-tools

	on:
	push:
	branches: [main, 0.15.x, 0.16.x, 0.17.x, 0.18.x, 0.19.x, 0.20.x, 1.0.x]
	pull_request:
	branches: [main, 0.15.x, 0.16.x, 0.17.x, 0.18.x, 0.19.x, 0.20.x, 1.0.x]

	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: true

	jobs:
	test:
	runs-on: ${{ matrix.os }}
	timeout-minutes: 20
	defaults:
	run:
	shell: bash -e {0} # -e to fail on error

	strategy:
	fail-fast: false
	matrix:
	include:
	- os: ubuntu-latest
	python: "3.9"
	- os: ubuntu-latest
	python: "3.10"
	- os: ubuntu-latest
	python: "3.10"
	pip-flags: "--pre"
	- os: ubuntu-latest
	python: "3.11"

	env:
	OS: ${{ matrix.os }}
	PYTHON: ${{ matrix.python }}

	steps:
	- uses: actions/checkout@v3
	- name: Set up Python ${{ matrix.python }}
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python }}
	cache: "pip"
	cache-dependency-path: "**/pyproject.toml"
	- name: Install test dependencies
	run: \|
	python -m pip install --upgrade pip wheel
	- name: Install dependencies
	run: \|
	pip install ${{ matrix.pip-flags }} ".[dev,pymde,autotune,hub]"
	- name: Test
	env:
	MPLBACKEND: agg
	PLATFORM: ${{ matrix.os }}
	DISPLAY: :42
	run: \|
	pytest -v --cov --color=yes
	- name: Upload coverage
	uses: codecov/codecov-action@v3

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