update docker to rapids-24.12 (#318)

* update docker to rapids-24.12 * update in workflow * revert to linux 22.04 * update conda * fix docker * remove fa2 from yaml * add release note
scverse · Jan 21, 2025 · d9059fd · d9059fd
1 parent 870c052
commit d9059fd
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diff --git a/.github/workflows/docker.yml b/.github/workflows/docker.yml
@@ -27,7 +27,7 @@ jobs:
     strategy:
       matrix:
         RAPIDS_VER:
-          - 24.08
+          - 24.12
     name: Build Docker images
     runs-on: ubuntu-latest
     permissions:

diff --git a/conda/rsc_rapids_24.08.yml b/conda/rsc_rapids_24.08.yml
@@ -13,7 +13,6 @@ dependencies:
  - cusparselt
  - leidenalg
  - louvain
- - fa2
  - jupyterlab
  - pip
  - pip:

diff --git a/conda/rsc_rapids_24.12.yml b/conda/rsc_rapids_24.12.yml
@@ -13,7 +13,6 @@ dependencies:
  - cusparselt
  - leidenalg
  - louvain
- - fa2
  - jupyterlab
  - pip
  - pip:

diff --git a/docker/Dockerfile.deps b/docker/Dockerfile.deps
@@ -5,12 +5,12 @@ FROM nvidia/cuda:${CUDA_VER}-base-${LINUX_VER}
 
 SHELL ["/bin/bash", "-euo", "pipefail", "-c"]
 
-ARG PYTHON_VER=3.11
+ARG PYTHON_VER=3.12
 
 ENV PATH=/opt/conda/bin:$PATH
 ENV PYTHON_VERSION=${PYTHON_VER}
 
-COPY --from=condaforge/miniforge3:24.3.0-0 /opt/conda /opt/conda
+COPY --from=condaforge/miniforge3:24.9.2-0 /opt/conda /opt/conda
 
 COPY rsc_rapids.yml rsc_rapids.yml
 

diff --git a/docker/docker-push.sh b/docker/docker-push.sh
@@ -2,7 +2,7 @@
 set -euxo pipefail
 
 docker_account=scverse
-rapids_version=24.08
+rapids_version=24.12
 grep -v -- '- rapids-singlecell' conda/rsc_rapids_${rapids_version}.yml > rsc_rapids.yml
 docker build -t rapids-singlecell-deps:latest -f docker/Dockerfile.deps .
 rm rsc_rapids.yml

diff --git a/docs/release-notes/0.11.1.md b/docs/release-notes/0.11.1.md
@@ -1,4 +1,4 @@
-### 0.10.11 {small}`the-future`
+### 0.10.11 {small}`2025-01-21`
 
 ```{rubric} Features
 ```
@@ -11,3 +11,4 @@
 ```{rubric} Misc
 ```
 * Pin `numba<0.61.0`{pr}`319` {smaller}`S Dicks`
+* Update Docker to `rapids-24.12` and `python-3.12`{pr}`318` {smaller}`S Dicks`
-Original file line number
+Diff line change
@@ Expand Up / @@ -13,7 +13,6 @@ dependencies: @@
      - cusparselt
      - leidenalg
      - louvain
-     - fa2
      - jupyterlab
      - pip
      - pip:
@@ Expand Down @@