add dependabot #91
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| name: Build and Deploy RMarkdown Website | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: main | |
| pull_request: | |
| branches: main | |
| permissions: | |
| contents: write | |
| jobs: | |
| build-and-deploy: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: r-lib/actions/setup-pandoc@v1 | |
| - uses: r-lib/actions/setup-r@v1 | |
| with: | |
| install-r: false | |
| use-public-rspm: true | |
| - name: Install R system requirements | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install libcurl4-openssl-dev libnetcdf-dev | |
| - name: Install R dependencies | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| install.packages(c("remotes", "rmarkdown", "rbi", "rbi.helpers", "pomp")) | |
| remotes::install_github("sbfnk/fitR", dependencies = TRUE) | |
| shell: Rscript {0} | |
| - name: Render Site | |
| run: Rscript -e "rmarkdown::render_site(input = 'Rmd', encoding = 'UTF-8')" | |
| - name: Deploy 🚀 | |
| id: deployment | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| folder: Rmd/_site | |
| clean: false |