test: fetch patient health diaries unit test #359
Workflow file for this run
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| name: Lint & Test | |
| on: | |
| push: | |
| release: | |
| types: [ created ] | |
| jobs: | |
| lint-and-test: | |
| strategy: | |
| matrix: | |
| platform: [ubuntu-latest] | |
| java-version: [8] | |
| maven: ['3.6.3'] | |
| runs-on: ${{ matrix.platform }} | |
| env: | |
| PLATFORM: ${{ matrix.platform }} | |
| JAVA_VERSION: ${{ matrix.java-version }} | |
| # Grant status permission for MULTI_STATUS # | |
| permissions: | |
| contents: write | |
| packages: read | |
| statuses: write | |
| security-events: write | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up JDK 8 | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: ${{ matrix.java-version }} | |
| distribution: adopt | |
| cache: maven | |
| - name: Setup Maven Action | |
| uses: s4u/[email protected] | |
| with: | |
| java-version: ${{ matrix.java-version }} | |
| maven-version: ${{ matrix.maven }} | |
| # Enable caching dependencies to speed up the build | |
| - name: Cache local Maven repository | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/.m2/repository | |
| key: ${{ runner.os }}-maven-${{ hashFiles('**/pom.xml') }} | |
| restore-keys: | | |
| ${{ runner.os }}-maven- | |
| # Checkout code | |
| - name: Checkout Code | |
| uses: actions/checkout@v3 | |
| with: | |
| # Full git history is needed to get a proper | |
| # list of changed files within `super-linter` | |
| fetch-depth: 0 | |
| - name: Lint Code Base | |
| uses: github/super-linter/[email protected] | |
| env: | |
| VALIDATE_ALL_CODEBASE: true | |
| VALIDATE_JAVA: true | |
| VALIDATE_XML: true | |
| DEFAULT_BRANCH: develop | |
| JAVA_FILE_NAME: checkstyle.xml | |
| - name: Download and Extract SQL Archive | |
| run: | | |
| curl -LJO "https://github.com/savannahghi/kenya-emr-releases/releases/download/v18.6.2/KenyaEMR.Release.Archive.xz" | |
| tar -xf KenyaEMR.Release.Archive.xz | |
| - name: Setup MySQL Server | |
| uses: shogo82148/actions-setup-mysql@v1 | |
| with: | |
| mysql-version: "5.6" | |
| - name: Create Database and Restore Data | |
| run: | | |
| mysql -h localhost -uroot -e "CREATE DATABASE IF NOT EXISTS $MYSQL_DATABASE;" | |
| mysql -h localhost -uroot $MYSQL_DATABASE < kenya-emr-release-content/databases/openmrs.sql | |
| env: | |
| MYSQL_DATABASE: openmrs | |
| - name: Download Liquibase 2.0.5 | |
| run: | | |
| mkdir -p liquibase | |
| curl -LJO https://github.com/liquibase/liquibase/releases/download/liquibase-parent-2.0.5/liquibase-2.0.5-bin.tar.gz | |
| tar -xzf liquibase-2.0.5-bin.tar.gz -C liquibase | |
| - name: Run Liquibase Migrations | |
| run: | | |
| java -jar liquibase/liquibase.jar \ | |
| --classpath=liquibase/liquibase.jar \ | |
| --driver=com.mysql.jdbc.Driver \ | |
| --url=jdbc:mysql://localhost:3306/$MYSQL_DATABASE \ | |
| --username=root \ | |
| update \ | |
| --changeLogFile=api/src/main/resources/liquibase.xml | |
| env: | |
| MYSQL_DATABASE: openmrs | |
| - name: Cleanup Downloaded Files | |
| run: | | |
| rm -rf kenya-emr-release-content | |
| rm KenyaEMR.Release.Archive.xz | |
| rm -rf liquibase | |
| rm liquibase-2.0.5-bin.tar.gz | |
| - name: Install Dependencies | |
| run: mvn clean install -Dartifact.version=1.0.0 -DskipTests=true -Dmaven.javadoc.skip=true --batch-mode --show-version --file pom.xml | |
| - name: Test and Generate Coverage Report | |
| run: mvn -B verify -P coverage --no-transfer-progress -Dartifact.version=1.0.0 -Ddb.name="openmrs" -Ddb.user="root" | |
| - name: Post Coverage Report to CodeCov | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| files: ./api/target/site/jacoco/jacoco.xml, ./omod/target/site/jacoco/jacoco.xml | |
| name: codecov-umbrella | |
| fail_ci_if_error: true | |
| verbose: true | |
| release: | |
| if: ${{ github.event_name == 'release' }} | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: read | |
| packages: write | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up JDK 8 | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: '8' | |
| distribution: 'adopt' | |
| server-id: github | |
| settings-path: ${{ github.workspace }} | |
| - name: Build Assets | |
| run: mvn clean install --file pom.xml -Dartifact.version=${{ github.event.release.tag_name }} -DskipTests=true | |
| - name: Generate Dependency Graph | |
| run: mvn com.github.ferstl:depgraph-maven-plugin:4.0.2:reactor -DgraphFormat=json -DoutputFileName=reactor.json -Dartifact.version=${{ github.event.release.tag_name }} | |
| - name: Prepare Released Files | |
| run: mkdir -p released-files | |
| working-directory: ${{ github.workspace }} | |
| - name: Copy omod to Released Files | |
| run: cp omod/target/mycarehub-${{ github.event.release.tag_name }}.omod released-files/ | |
| working-directory: ${{ github.workspace }} | |
| - name: "✏️ Generate release changelog" | |
| uses: heinrichreimer/[email protected] | |
| with: | |
| token: ${{ secrets.RELEASE_PAT }} | |
| - name: Upload Release Assets | |
| uses: softprops/action-gh-release@v1 | |
| with: | |
| files: released-files/mycarehub-${{ github.event.release.tag_name }}.omod | |
| tag_name: ${{ github.event.release.tag_name }} | |
| body_path: CHANGELOG.md | |
| token: ${{ secrets.RELEASE_PAT }} |