shinyPCA

R package holding a R Shiny application for Principipal Component Analysis

Install and load package

library(devtools)
install_github("sarahbonnin/shinyPCA")
library("shinyPCA")

Run app

runShinyPCA()

How to run app

User input:

• Upload expression matrix (compulsory):
  • Each column of the matrix will be represented as a point in the PCA.
• Upload sample metadata file (optional):
  • Text file that contains columns with samples metadata: the first column must correspond to the first row of the input file!

Customize plot:

• Plot title
• Title font size
• x-axis and y-axis font sizes
• Point label size