Information - Local Testing

[DLBPointon]

Local testing for small and large and data set.

Standard command:

bsub -Is -tty -e error -o out -n 2 -q oversubscribed -M4000 -R'select[mem>4000] rusage[mem=4000] span[hosts=1]' 'nextflow run main.nf -profile singularity,sanger --input assets/local_testing/nxOscSUBSET.yaml --outdir OscSUBSET-TEST -entry FULL'

bsub -Is -tty -e error -o out -n 2 -q oversubscribed -M4000 -R'select[mem>4000] rusage[mem=4000] span[hosts=1]' 'nextflow run main.nf -profile singularity,sanger --input assets/local_testing/nxOscSUBSET.yaml --outdir OscSUBSET-TEST -entry RAPID'