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Replace BlastN by Minimap2 splice. #104

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wants to merge 13 commits into from
Closed

Replace BlastN by Minimap2 splice. #104

wants to merge 13 commits into from

Commits on Aug 6, 2024

  1. Replace blastn module by minimap2_splice

    @reichan1998
    reichan1998 committed Aug 6, 2024
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  2. edit minimap2_splice

    @reichan1998
    reichan1998 committed Aug 6, 2024
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  3. fix editorconfig-checker

    @reichan1998
    reichan1998 committed Aug 6, 2024
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  4. fix format

    @reichan1998
    reichan1998 committed Aug 6, 2024
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  5. fix format

    @reichan1998
    reichan1998 committed Aug 6, 2024
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Commits on Aug 9, 2024

  1. set splice using ext.args in the existing minimap2_align nf-core module

    @reichan1998
    reichan1998 committed Aug 9, 2024
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  2. fix format

    @reichan1998
    reichan1998 committed Aug 9, 2024
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  3. fix format

    @reichan1998
    reichan1998 committed Aug 9, 2024
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  4. fix nf-core lint

    @reichan1998
    reichan1998 committed Aug 9, 2024
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  5. change MINIMAP2_SPLICE to MINIMAP2_ALIGN

    @reichan1998
    reichan1998 committed Aug 9, 2024
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Commits on Aug 13, 2024

  1. Return the default MINIMAP_ALIGN, gzipped vectorDB, modify pacbio_fil… 

    …ter.sh
    @reichan1998
    reichan1998 committed Aug 13, 2024
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  2. fix nf-core linting

    @reichan1998
    reichan1998 committed Aug 13, 2024
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  3. fix nf-core linting

    @reichan1998
    reichan1998 committed Aug 13, 2024
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