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v0.5.0 – Snorlax

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@muffato muffato released this 31 Jul 19:49
· 38 commits to main since this release
1c0bf53

[0.5.0] – Snorlax – [2024-07-31]

General tidy up of the configuration and the pipeline

Enhancements & fixes

  • Increased the resources for blastn
  • Removed some options that were not used or not needed
  • All relevant outputs are now copied to the output directory
  • Fixed some blast parameters to match the behaviour of the Snakemake pipeline
  • Fixed parsing of samplesheets from fetchngs to capture correct data type

Parameters

Old parameter New parameter
--taxa_file
--blastp_outext
--blastp_cols
--blastx_outext
--blastx_cols

NB: Parameter has been updated if both old and new parameter information is present.
NB: Parameter has been added if just the new parameter information is present.
NB: Parameter has been removed if new parameter information isn't present.