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Add FASTA output to pretext-to-tpf script Build and Publish #23: Commit 2f68fba pushed by jgrg
November 4, 2024 18:48 39s main
main
November 4, 2024 18:48 39s
Tests for reverse-complement code Build and Publish #22: Commit 62c8b9c pushed by jgrg
November 4, 2024 17:38 50s main
main
November 4, 2024 17:38 50s
FastaSeq object to improve tests Build and Publish #21: Commit ba9c137 pushed by jgrg
November 4, 2024 13:54 43s main
main
November 4, 2024 13:54 43s
Functional fwd and rev sequence fetching Build and Publish #20: Commit afaf833 pushed by jgrg
November 1, 2024 21:22 44s main
main
November 1, 2024 21:22 44s
FastaStream class Build and Publish #19: Commit 80b14eb pushed by jgrg
October 31, 2024 18:44 40s main
main
October 31, 2024 18:44 40s
FastaIndex object for building and loading FAI and AGP indexes Build and Publish #18: Commit daf438e pushed by jgrg
October 30, 2024 15:39 41s main
main
October 30, 2024 15:39 41s
Buffering to reduce number of calls to re.finditer() Build and Publish #17: Commit 8bdf90b pushed by jgrg
October 29, 2024 17:48 44s main
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October 29, 2024 17:48 44s
FASTA indexing Build and Publish #16: Commit 6998203 pushed by jgrg
October 29, 2024 16:52 50s main
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October 29, 2024 16:52 50s
Report gaps between cut fragments Build and Publish #15: Commit fee2a0d pushed by jgrg
October 18, 2024 17:02 1m 25s main
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October 18, 2024 17:02 1m 25s
Striving for clarity in overlap arithmetic Build and Publish #14: Commit 6f0ce23 pushed by jgrg
October 18, 2024 15:52 42s main
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October 18, 2024 15:52 42s
New Fragment.gap_between() method Build and Publish #13: Commit 6a93692 pushed by jgrg
October 18, 2024 15:36 1m 11s main
main
October 18, 2024 15:36 1m 11s
Trap switching of pretext-to-tpf "-a" and "-p" arguments Build and Publish #12: Commit 84d5670 pushed by jgrg
October 18, 2024 11:29 48s main
main
October 18, 2024 11:29 48s
Trap unpainted Unloc fragments Build and Publish #11: Commit 919d500 pushed by jgrg
October 18, 2024 11:08 42s main
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October 18, 2024 11:08 42s
Clarification of break and join counting set operations Build and Publish #10: Commit a3f7645 pushed by jgrg
October 17, 2024 16:35 40s main
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October 17, 2024 16:35 40s
Add pyyaml dependency Build and Publish #9: Commit 7d83f7d pushed by jgrg
October 17, 2024 16:18 46s main
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October 17, 2024 16:18 46s
Per-haplotype stats Build and Publish #8: Commit 1caedc2 pushed by jgrg
October 17, 2024 16:15 54s main
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October 17, 2024 16:15 54s
Implementation of Target tag for assemblies with large numbers of con… Build and Publish #7: Commit 06053ad pushed by jgrg
October 15, 2024 17:11 43s main
main
October 15, 2024 17:11 43s
Correct sorting of nematode Roman numeral chromosomes Build and Publish #6: Commit ea32e23 pushed by jgrg
October 15, 2024 11:41 48s main
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October 15, 2024 11:41 48s
Enable tagging unplaced scaffolds with haplotypes Build and Publish #5: Commit cdf5b37 pushed by jgrg
October 14, 2024 17:47 48s main
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October 14, 2024 17:47 48s
Case-insensitive matching of unplaced scaffolds with their haplotpyes Build and Publish #4: Commit 5820d2a pushed by jgrg
October 14, 2024 17:13 1m 37s main
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October 14, 2024 17:13 1m 37s
ruff linting and organising imports Build and Publish #3: Commit 379daa0 pushed by jgrg
September 2, 2024 13:48 30s main
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September 2, 2024 13:48 30s
Merge pull request #2 from sanger-tol/dockerise Build and Publish #2: Commit 57626b3 pushed by yumisims
August 22, 2024 19:47 29s v1.0.2
v1.0.2
August 22, 2024 19:47 29s
Merge pull request #2 from sanger-tol/dockerise Build and Publish #1: Commit 57626b3 pushed by yumisims
August 22, 2024 19:09 2m 0s main
main
August 22, 2024 19:09 2m 0s