testing new_process = FALSE

rformassspectrometry · Oct 7, 2024 · ecea93b · ecea93b
1 parent 2297035
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diff --git a/.github/workflows/build_deploy.yaml b/.github/workflows/build_deploy.yaml
@@ -55,8 +55,7 @@ jobs:
           git config --global user.email "[email protected]"
           git config --global user.name "GitHub Action"
           git config --global --add safe.directory /__w/metabonaut/metabonaut
-          Rscript -e "pkgdown::init_site()"
-          Rscript -e "pkgdown::build_article('a-end-to-end-untargeted-metabolomics', quiet = FALSE)"
+          Rscript -e "pkgdown::build_article('a-end-to-end-untargeted-metabolomics', new_process = FALSE, quiet = FALSE)"
           Rscript -e "pkgdown::deploy_to_branch(lazy = TRUE, new_process = FALSE, install = FALSE)"
         shell: bash {0}
         ## Note that you need to run pkgdown::deploy_to_branch(new_process = FALSE)

diff --git a/.gitignore b/.gitignore
@@ -4,7 +4,6 @@ local_data
 *.so
 /.quarto/
 /_site/
-*.png
 *.html
 *.RData
 *.rmarkdown

diff --git a/README.md b/README.md
@@ -1,7 +1,11 @@
-# Exploring and Analyzing Untargeted Metabolomics Data
+
+
+# Let's explore and learn to analyze untargeted metabolomics data
 
 [![License: CC BY-NC 4.0](https://img.shields.io/badge/License-CC%20BY--NC%204.0-lightgrey.svg)](https://creativecommons.org/licenses/by-nc/4.0/)
 
+![metabonaut](man/figures/sitcker_draft.png)
+
 Welcome to **Metabonaut**! :astronaut:
 
 This initiative presents a series of workflows based on a small LC-MS/MS dataset, 

diff --git a/man/figures/sitcker_draft.png b/man/figures/sitcker_draft.png