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🎉 gains initial R package scaffolding (#1)
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^multiverse\.Rproj$ | ||
^\.Rproj\.user$ | ||
^LICENSE\.md$ | ||
^\.github$ | ||
^codecov\.yml$ | ||
^_pkgdown\.yml$ | ||
^docs$ | ||
^pkgdown$ |
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*.html |
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# Contributing to multiverse | ||
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This outlines how to propose a change to multiverse. | ||
For a detailed discussion on contributing to this and other tidyverse packages, please see the [development contributing guide](https://rstd.io/tidy-contrib) and our [code review principles](https://code-review.tidyverse.org/). | ||
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## Fixing typos | ||
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You can fix typos, spelling mistakes, or grammatical errors in the documentation directly using the GitHub web interface, as long as the changes are made in the _source_ file. | ||
This generally means you'll need to edit [roxygen2 comments](https://roxygen2.r-lib.org/articles/roxygen2.html) in an `.R`, not a `.Rd` file. | ||
You can find the `.R` file that generates the `.Rd` by reading the comment in the first line. | ||
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## Bigger changes | ||
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If you want to make a bigger change, it's a good idea to first file an issue and make sure someone from the team agrees that it’s needed. | ||
If you’ve found a bug, please file an issue that illustrates the bug with a minimal | ||
[reprex](https://www.tidyverse.org/help/#reprex) (this will also help you write a unit test, if needed). | ||
See our guide on [how to create a great issue](https://code-review.tidyverse.org/issues/) for more advice. | ||
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### Pull request process | ||
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* Fork the package and clone onto your computer. If you haven't done this before, we recommend using `usethis::create_from_github("r-staceans/multiverse", fork = TRUE)`. | ||
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* Install all development dependencies with `devtools::install_dev_deps()`, and then make sure the package passes R CMD check by running `devtools::check()`. | ||
If R CMD check doesn't pass cleanly, it's a good idea to ask for help before continuing. | ||
* Create a Git branch for your pull request (PR). We recommend using `usethis::pr_init("brief-description-of-change")`. | ||
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* Make your changes, commit to git, and then create a PR by running `usethis::pr_push()`, and following the prompts in your browser. | ||
The title of your PR should briefly describe the change. | ||
The body of your PR should contain `Fixes #issue-number`. | ||
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* For user-facing changes, add a bullet to the top of `NEWS.md` (i.e. just below the first header). Follow the style described in <https://style.tidyverse.org/news.html>. | ||
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### Code style | ||
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* New code should follow the tidyverse [style guide](https://style.tidyverse.org). | ||
You can use the [styler](https://CRAN.R-project.org/package=styler) package to apply these styles, but please don't restyle code that has nothing to do with your PR. | ||
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* We use [roxygen2](https://cran.r-project.org/package=roxygen2), with [Markdown syntax](https://cran.r-project.org/web/packages/roxygen2/vignettes/rd-formatting.html), for documentation. | ||
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* We use [testthat](https://cran.r-project.org/package=testthat) for unit tests. | ||
Contributions with test cases included are easier to accept. | ||
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## Code of Conduct | ||
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Please note that the multiverse project is released with a | ||
[Contributor Code of Conduct](CODE_OF_CONDUCT.md). By contributing to this | ||
project you agree to abide by its terms. |
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
# | ||
# NOTE: This workflow is overkill for most R packages and | ||
# check-standard.yaml is likely a better choice. | ||
# usethis::use_github_action("check-standard") will install it. | ||
on: | ||
push: | ||
branches: [main, master] | ||
pull_request: | ||
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name: R-CMD-check.yaml | ||
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permissions: read-all | ||
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jobs: | ||
R-CMD-check: | ||
runs-on: ${{ matrix.config.os }} | ||
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name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
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strategy: | ||
fail-fast: false | ||
matrix: | ||
config: | ||
- {os: macos-latest, r: 'release'} | ||
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- {os: windows-latest, r: 'release'} | ||
# use 4.0 or 4.1 to check with rtools40's older compiler | ||
- {os: windows-latest, r: 'oldrel-4'} | ||
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- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | ||
- {os: ubuntu-latest, r: 'release'} | ||
- {os: ubuntu-latest, r: 'oldrel-1'} | ||
- {os: ubuntu-latest, r: 'oldrel-2'} | ||
- {os: ubuntu-latest, r: 'oldrel-3'} | ||
- {os: ubuntu-latest, r: 'oldrel-4'} | ||
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env: | ||
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
R_KEEP_PKG_SOURCE: yes | ||
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steps: | ||
- uses: actions/checkout@v4 | ||
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- uses: r-lib/actions/setup-pandoc@v2 | ||
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- uses: r-lib/actions/setup-r@v2 | ||
with: | ||
r-version: ${{ matrix.config.r }} | ||
http-user-agent: ${{ matrix.config.http-user-agent }} | ||
use-public-rspm: true | ||
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- uses: r-lib/actions/setup-r-dependencies@v2 | ||
with: | ||
extra-packages: any::rcmdcheck | ||
needs: check | ||
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- uses: r-lib/actions/check-r-package@v2 | ||
with: | ||
upload-snapshots: true | ||
build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")' |
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
on: | ||
push: | ||
branches: [main, master] | ||
pull_request: | ||
release: | ||
types: [published] | ||
workflow_dispatch: | ||
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name: pkgdown.yaml | ||
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permissions: read-all | ||
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jobs: | ||
pkgdown: | ||
runs-on: ubuntu-latest | ||
# Only restrict concurrency for non-PR jobs | ||
concurrency: | ||
group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }} | ||
env: | ||
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
permissions: | ||
contents: write | ||
steps: | ||
- uses: actions/checkout@v4 | ||
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- uses: r-lib/actions/setup-pandoc@v2 | ||
|
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- uses: r-lib/actions/setup-r@v2 | ||
with: | ||
use-public-rspm: true | ||
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- uses: r-lib/actions/setup-r-dependencies@v2 | ||
with: | ||
extra-packages: any::pkgdown, local::. | ||
needs: website | ||
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- name: Build site | ||
run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE) | ||
shell: Rscript {0} | ||
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- name: Deploy to GitHub pages 🚀 | ||
if: github.event_name != 'pull_request' | ||
uses: JamesIves/[email protected] | ||
with: | ||
clean: false | ||
branch: gh-pages | ||
folder: docs |
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
on: | ||
issue_comment: | ||
types: [created] | ||
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name: pr-commands.yaml | ||
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permissions: read-all | ||
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jobs: | ||
document: | ||
if: ${{ github.event.issue.pull_request && (github.event.comment.author_association == 'MEMBER' || github.event.comment.author_association == 'OWNER') && startsWith(github.event.comment.body, '/document') }} | ||
name: document | ||
runs-on: ubuntu-latest | ||
env: | ||
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
permissions: | ||
contents: write | ||
steps: | ||
- uses: actions/checkout@v4 | ||
|
||
- uses: r-lib/actions/pr-fetch@v2 | ||
with: | ||
repo-token: ${{ secrets.GITHUB_TOKEN }} | ||
|
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- uses: r-lib/actions/setup-r@v2 | ||
with: | ||
use-public-rspm: true | ||
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- uses: r-lib/actions/setup-r-dependencies@v2 | ||
with: | ||
extra-packages: any::roxygen2 | ||
needs: pr-document | ||
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- name: Document | ||
run: roxygen2::roxygenise() | ||
shell: Rscript {0} | ||
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- name: commit | ||
run: | | ||
git config --local user.name "$GITHUB_ACTOR" | ||
git config --local user.email "[email protected]" | ||
git add man/\* NAMESPACE | ||
git commit -m 'Document' | ||
- uses: r-lib/actions/pr-push@v2 | ||
with: | ||
repo-token: ${{ secrets.GITHUB_TOKEN }} | ||
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style: | ||
if: ${{ github.event.issue.pull_request && (github.event.comment.author_association == 'MEMBER' || github.event.comment.author_association == 'OWNER') && startsWith(github.event.comment.body, '/style') }} | ||
name: style | ||
runs-on: ubuntu-latest | ||
env: | ||
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
permissions: | ||
contents: write | ||
steps: | ||
- uses: actions/checkout@v4 | ||
|
||
- uses: r-lib/actions/pr-fetch@v2 | ||
with: | ||
repo-token: ${{ secrets.GITHUB_TOKEN }} | ||
|
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- uses: r-lib/actions/setup-r@v2 | ||
|
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- name: Install dependencies | ||
run: install.packages("styler") | ||
shell: Rscript {0} | ||
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- name: Style | ||
run: styler::style_pkg() | ||
shell: Rscript {0} | ||
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- name: commit | ||
run: | | ||
git config --local user.name "$GITHUB_ACTOR" | ||
git config --local user.email "[email protected]" | ||
git add \*.R | ||
git commit -m 'Style' | ||
- uses: r-lib/actions/pr-push@v2 | ||
with: | ||
repo-token: ${{ secrets.GITHUB_TOKEN }} |
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
on: | ||
push: | ||
branches: [main, master] | ||
pull_request: | ||
|
||
name: test-coverage.yaml | ||
|
||
permissions: read-all | ||
|
||
jobs: | ||
test-coverage: | ||
runs-on: ubuntu-latest | ||
env: | ||
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
|
||
steps: | ||
- uses: actions/checkout@v4 | ||
|
||
- uses: r-lib/actions/setup-r@v2 | ||
with: | ||
use-public-rspm: true | ||
|
||
- uses: r-lib/actions/setup-r-dependencies@v2 | ||
with: | ||
extra-packages: any::covr, any::xml2 | ||
needs: coverage | ||
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- name: Test coverage | ||
run: | | ||
cov <- covr::package_coverage( | ||
quiet = FALSE, | ||
clean = FALSE, | ||
install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package") | ||
) | ||
covr::to_cobertura(cov) | ||
shell: Rscript {0} | ||
|
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- uses: codecov/codecov-action@v4 | ||
with: | ||
# Fail if error if not on PR, or if on PR and token is given | ||
fail_ci_if_error: ${{ github.event_name != 'pull_request' || secrets.CODECOV_TOKEN }} | ||
file: ./cobertura.xml | ||
plugin: noop | ||
disable_search: true | ||
token: ${{ secrets.CODECOV_TOKEN }} | ||
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- name: Show testthat output | ||
if: always() | ||
run: | | ||
## -------------------------------------------------------------------- | ||
find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true | ||
shell: bash | ||
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- name: Upload test results | ||
if: failure() | ||
uses: actions/upload-artifact@v4 | ||
with: | ||
name: coverage-test-failures | ||
path: ${{ runner.temp }}/package |
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.Rproj.user | ||
.Rhistory | ||
.RData | ||
.Ruserdata | ||
docs |
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Package: multiverse | ||
Title: What the Package Does (One Line, Title Case) | ||
Version: 0.0.0.9000 | ||
Authors@R: | ||
person("Jackson", "Hoffart", , "[email protected]", role = c("aut", "cre"), | ||
comment = c(ORCID = "0000-0002-8600-5042")) | ||
Description: What the package does (one paragraph). | ||
License: MIT + file LICENSE | ||
URL: https://github.com/r-staceans/multiverse, https://r-staceans.github.io/multiverse/ | ||
BugReports: https://github.com/r-staceans/multiverse/issues | ||
Suggests: | ||
testthat (>= 3.0.0) | ||
Config/testthat/edition: 3 | ||
Encoding: UTF-8 | ||
Roxygen: list(markdown = TRUE) | ||
RoxygenNote: 7.3.2 |
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YEAR: 2024 | ||
COPYRIGHT HOLDER: multiverse authors |
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# MIT License | ||
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Copyright (c) 2024 multiverse authors | ||
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Permission is hereby granted, free of charge, to any person obtaining a copy | ||
of this software and associated documentation files (the "Software"), to deal | ||
in the Software without restriction, including without limitation the rights | ||
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell | ||
copies of the Software, and to permit persons to whom the Software is | ||
furnished to do so, subject to the following conditions: | ||
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The above copyright notice and this permission notice shall be included in all | ||
copies or substantial portions of the Software. | ||
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR | ||
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, | ||
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE | ||
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER | ||
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, | ||
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE | ||
SOFTWARE. |
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# Generated by roxygen2: do not edit by hand | ||
|
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add <- function(x, y) { | ||
x + y | ||
} |
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#' @keywords internal | ||
"_PACKAGE" | ||
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## usethis namespace: start | ||
## usethis namespace: end | ||
NULL |
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# multiverse | ||
<!-- badges: start --> | ||
[![R-CMD-check](https://github.com/r-staceans/multiverse/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/r-staceans/multiverse/actions/workflows/R-CMD-check.yaml) | ||
[![Codecov test coverage](https://codecov.io/gh/r-staceans/multiverse/graph/badge.svg)](https://app.codecov.io/gh/r-staceans/multiverse) | ||
[![Lifecycle: experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental) | ||
<!-- badges: end --> |
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url: https://r-staceans.github.io/multiverse/ | ||
template: | ||
bootstrap: 5 | ||
development: | ||
mode: auto |
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