remove unneeded imports

quinlan-lab · Jan 11, 2024 · d1d9926 · d1d9926
1 parent 3b61baf
commit d1d9926
Showing 1 changed file with 1 addition and 3 deletions.
diff --git a/ihd/run_ihd_scan.py b/ihd/run_ihd_scan.py
@@ -17,8 +17,6 @@
 from schema import IHDResultSchema, MutationSchema
 import numba
 import allel
-import tqdm
-import matplotlib.pyplot as plt
 from scipy.spatial.distance import squareform
 
 
@@ -191,7 +189,7 @@ def main(args):
     combined_conf_int_df = []
 
     conf_int_chroms = ["4", "6"]
-    for chrom, chrom_df in tqdm.tqdm(geno_asint_filtered_merged.groupby("chromosome")):
+    for chrom, chrom_df in geno_asint_filtered_merged.groupby("chromosome"):
         if chrom not in conf_int_chroms:
             continue