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extend install instructions to also install g++ #3354

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Feb 14, 2024
Merged

extend install instructions to also install g++ #3354

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57d1b14
Update CHANGELOG.md
antgonza Jan 29, 2024
9c6e60e
Update INSTALL.md
sjanssen2 Feb 14, 2024
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2 changes: 1 addition & 1 deletion CHANGELOG.md
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Expand Up @@ -13,7 +13,7 @@ Deployed on January 8th, 2024
* Workflow definitions can now use sample or preparation information columns/values to differentiate between them.
* Updated the Adapter and host filtering plugin (qp-fastp-minimap2) to v2023.12 addressing a bug in adapter filtering; [more information](https://qiita.ucsd.edu/static/doc/html/processingdata/qp-fastp-minimap2.html).
* Other fixes: [3334](https://github.com/qiita-spots/qiita/pull/3334), [3338](https://github.com/qiita-spots/qiita/pull/3338). Thank you @sjanssen2.
* The internal Sequence Processing Pipeline is now using the human pan-genome reference, together with the GRCh38 genome + PhiX and CHM13 genome for human host filtering.
* The internal Sequence Processing Pipeline is now using the human pan-genome reference, together with the GRCh38 genome + PhiX and T2T-CHM13v2.0 genome for human host filtering.


Version 2023.10
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4 changes: 2 additions & 2 deletions INSTALL.md
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Expand Up @@ -162,9 +162,9 @@ Navigate to the cloned directory and ensure your conda environment is active:
cd qiita
source activate qiita
```
If you are using Ubuntu or a Windows Subsystem for Linux (WSL), you will need to ensure that you have a C++ compiler and that development libraries and include files for PostgreSQL are available. Type `cc` into your system to ensure that it doesn't result in `program not found`. The following commands will install a C++ compiler and `libpq-dev`:
If you are using Ubuntu or a Windows Subsystem for Linux (WSL), you will need to ensure that you have a C++ compiler and that development libraries and include files for PostgreSQL are available. Type `cc` into your system to ensure that it doesn't result in `program not found`. If you use the the GNU Compiler Collection, make sure to have `gcc` and `g++` available. The following commands will install a C++ compiler and `libpq-dev`:
```bash
sudo apt install gcc # alternatively, you can install clang instead
sudo apt install gcc g++ # alternatively, you can install clang instead
sudo apt-get install libpq-dev
```
Install Qiita (this occurs through setuptools' `setup.py` file in the qiita directory):
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