Merge pull request #41 from pyscal/fix_vis

Fix vis

.bumpversion.cfg

@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 3.2.1
+current_version = 3.2.2
 commit = True
 tag = True
 

setup.py

@@ -7,7 +7,7 @@
 
 setup(
     name='pyscal3',
-    version='3.2.1',
+    version='3.2.2',
     author='Sarath Menon',
     author_email='[email protected]',
     description='Python library written in C++ for calculation of local atomic structural environment',

src/pyscal3/core.py

@@ -181,10 +181,15 @@ def __init__(self, filename=None, format="lammps-dump",
             self.box = box
             self._atoms.from_dict(atoms)
 
+        self._refresh_internal_methods()
+
+
+    def _refresh_internal_methods(self):
         #customised methods for the class
         self.modify = AttrSetter()
         self.modify.head = operations
         mapdict = {}
+
         #repeat methid
         mapdict["repeat"] = update_wrapper(partial(operations.repeat, self), operations.repeat)
         mapdict["transform_to_cubic_cell"] = update_wrapper(partial(operations.extract_cubic_representation, self), operations.extract_cubic_representation)
@@ -259,6 +264,10 @@ def __init__(self, filename=None, format="lammps-dump",
         self.show._add_attribute(mapdict)
 
 
+    #def _repeat(self, *args, **kwargs):
+    #    return operations.repeat(self, *args, **kwargs)
+    #_repeat.__doc__ = operations.repeat.__doc__
+
     def iter_atoms(self):
         return self.atoms.iter_atoms()