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Can't install via conda on Apple Silicon macOS #1206

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koh2ng0 opened this issue Jul 26, 2023 · 2 comments
Closed

Can't install via conda on Apple Silicon macOS #1206

koh2ng0 opened this issue Jul 26, 2023 · 2 comments

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@koh2ng0
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koh2ng0 commented Jul 26, 2023

Hi,
I tried to install pysam in macOS vi conda, such as conda install -c bioconda pysam.
But, It couldn't work with the below error.
Screenshot 2023-07-26 at 21 03 39
How can I install pysam in macOS via conda?
My conda information is this.
Screenshot 2023-07-26 at 21 04 37
Thanks.

@jmarshall
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jmarshall commented Jul 27, 2023

Bioconda does not yet make Apple Silicon builds, which is a bioconda issue that has nothing to do with pysam.
See bioconda/bioconda-utils#706.

The pysam project provides wheels for Apple Silicon, so you can install easily via pip instead.

@jmarshall jmarshall changed the title Pysam installation in macOS via conda Pysam installation via conda on Apple Silicon macOS Jul 27, 2023
@jmarshall jmarshall pinned this issue Jul 27, 2023
@jmarshall jmarshall changed the title Pysam installation via conda on Apple Silicon macOS Can't install via conda on Apple Silicon macOS Jul 27, 2023
@jmarshall
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As of today, bioconda supports Apple silicon and pysam has been built for this platform. See bioconda/bioconda-recipes#33333 (comment).

@jmarshall jmarshall unpinned this issue Jul 11, 2024
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