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  1. samtools/htslib samtools/htslib Public

    C library for high-throughput sequencing data formats

    C 812 447

  2. pysam-developers/pysam pysam-developers/pysam Public

    Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…

    Cython 781 274

  3. samtools/hts-specs samtools/hts-specs Public

    Specifications of SAM/BAM and related high-throughput sequencing file formats

    TeX 653 174

  4. cansam cansam Public

    C++ binding for SAM/BAM files

    C++ 7 1