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Addresses the deprecation messages of some jax.core functionalities #3757

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Job	Run time
lint (3.9)	4m 19s
lint (3.10)	4m 20s
lint (3.12)	7m 35s
test-inference (3.9)	34m 5s
test-inference (3.10)	36m 3s
test-modeling (3.9)	25m 53s
examples (3.10)	13m 17s
test-modeling (3.10)	27m 35s
finish	2s
	2h 33m 9s