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Restructure user guide with subsections #3741

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Run time

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Job	Run time
test (ubuntu-latest, 3.9, conda)	2m 9s
test (ubuntu-latest, 3.9, bare)	1m 1s
test (ubuntu-latest, 3.10, conda)	1m 56s
test (ubuntu-latest, 3.10, bare)	56s
test (ubuntu-latest, 3.11, conda)	1m 56s
test (ubuntu-latest, 3.11, bare)	52s
test (ubuntu-latest, 3.12, conda)	2m 0s
test (ubuntu-latest, 3.12, bare)	57s
test (macos-latest, 3.9, bare)	1m 13s
test (macos-latest, 3.10, bare)	55s
test (macos-latest, 3.11, bare)	42s
test (macos-latest, 3.12, bare)	53s
test (windows-latest, 3.9, conda)	3m 34s
test (windows-latest, 3.10, conda)	4m 27s
test (windows-latest, 3.11, conda)	4m 54s
test (windows-latest, 3.12, conda)	3m 45s
test (ubuntu-latest, 3.9, conda, -min)	58s
	33m 8s