- This is a simple simulations of Hodgkin Huxley Model in Haskell. The velocity of the ions is proportional to the current of those ions. The vertical stripes in the middle is membrane - yellow parts are stable, others are channels for ions, their color is derived proportionally to the gating variable from the model. The ratio of ions is resting potential ratio.
| Currents | Gating variables |
|---|---|
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brew install pkg-config cairoThis project relies on the Haskell Stack tool.
It is recommended to get Stack with batteries included by installing Haskell Platform.
To build this project simply run
stack buildThis will install all dependencies, including a proper version of GHC (which should be there already if you have Haskell Platform 8.4.3).
This project has one executable that you can run with
stack exec my-project-exe
During development it is recommended a combination of build and exec:
stack build && stack exec my-project-exe
Alternatively, you can run
stack build file-watch
For continuous builds in the background.
However, in some versions of stack the exec file if unavalibale in your local directory after build. If you have any problems, see this Stack Tutorial for the beginners and use
stack install --local-bin-path=<dir>
stack test --fast
You can run GHCi (GHC interpreter) for the whole project with
stack ghci
or
stack repl
During development it might be beneficial to work using an interpreter for quick reloads, interacting with various parts of code and trying out things.
Note that you can run executable from GHCi by invoking main.