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Pluskal lab

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  1. MassSpecGym MassSpecGym Public

    MassSpecGym: A benchmark for the discovery and identification of molecules (NeurIPS 2024 Spotlight)

    Jupyter Notebook 25 5

  2. DreaMS DreaMS Public

    DreaMS (Deep Representations Empowering the Annotation of Mass Spectra)

    Jupyter Notebook 20 6

  3. TerpeneMiner TerpeneMiner Public

    Highly accurate discovery of terpene synthases powered by machine learning

    Python 5 3

  4. DreaMS_legacy DreaMS_legacy Public

    Forked from roman-bushuiev/DreaMS_legacy

    DreaMS (Deep Representations Empowering The Annotation of Mass Spectra)

    Jupyter Notebook 5

  5. TPS_mining_v1 TPS_mining_v1 Public

    Forked from CalounovaT/TPS

    Older repository for the terpene synthases mining project.

    Python

  6. TPSdownloader TPSdownloader Public

    Forked from tomas-pluskal/TPSdownloader

    Fetch TPS cyclases information from various sources

    Python

Repositories

Showing 10 of 12 repositories
  • TerpeneMiner Public

    Highly accurate discovery of terpene synthases powered by machine learning

    pluskal-lab/TerpeneMiner’s past year of commit activity
    Python 5 MIT 3 1 2 Updated Nov 4, 2024
  • MassSpecGym Public

    MassSpecGym: A benchmark for the discovery and identification of molecules (NeurIPS 2024 Spotlight)

    pluskal-lab/MassSpecGym’s past year of commit activity
    Jupyter Notebook 25 MIT 5 0 2 Updated Nov 1, 2024
  • msn_tree_library Public Forked from corinnabrungs/msn_tree_library
    pluskal-lab/msn_tree_library’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Nov 1, 2024
  • DreaMS Public

    DreaMS (Deep Representations Empowering the Annotation of Mass Spectra)

    pluskal-lab/DreaMS’s past year of commit activity
    Jupyter Notebook 20 MIT 6 1 0 Updated Oct 16, 2024
  • ThermoRawFileParserMacLinux Public
    pluskal-lab/ThermoRawFileParserMacLinux’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Sep 14, 2024
  • Cytochromes_P450 Public Forked from emafialova/Cytochromes_P450
    pluskal-lab/Cytochromes_P450’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Jul 22, 2024
  • massive-vdbs Public

    Applying ultra-fast vector searches to MASSIVE mass spec data

    pluskal-lab/massive-vdbs’s past year of commit activity
    Python 0 0 0 0 Updated Jun 4, 2024
  • DreaMS_legacy Public Forked from roman-bushuiev/DreaMS_legacy

    DreaMS (Deep Representations Empowering The Annotation of Mass Spectra)

    pluskal-lab/DreaMS_legacy’s past year of commit activity
    Jupyter Notebook 5 MIT 2 0 0 Updated May 18, 2024
  • pombox Public Forked from TeoHebra/pombox

    POMBOX is a GoldenGate toolkit dedicated to the fission yeast Schizosaccharomyces pombe

    pluskal-lab/pombox’s past year of commit activity
    HTML 0 MIT 16,327 0 0 Updated Aug 21, 2023
  • TPS_mining_v1 Public Forked from CalounovaT/TPS

    Older repository for the terpene synthases mining project.

    pluskal-lab/TPS_mining_v1’s past year of commit activity
    Python 0 1 0 0 Updated May 2, 2023
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