Repositories list

• nccr_rnaseq

  Public
  Python

  •0•0•0•0•Updated Nov 11, 2024Nov 11, 2024

• bioutils

  Public
  Python

  •0•0•0•0•Updated Sep 23, 2024Sep 23, 2024

• nguyenb_rbtnseq_2024

  Public
  Python

  •0•0•0•0•Updated Aug 19, 2024Aug 19, 2024

• ggiger_endosymbioses_2024

  Public
  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Aug 13, 2024Aug 13, 2024

• mbarq_app

  Public
  Python

  •1•1•0•0•Updated Jul 26, 2024Jul 26, 2024

• padhic_chilika_2024

  Public
  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jul 24, 2024Jul 24, 2024

• mbarq

  Public
  Analysis of barcoded sequence data

  bioinformatics

  Python

  •0•2•0•0•Updated Jun 19, 2024Jun 19, 2024

• camplicon

  Public
  Software for designing custom amplicon primers

  Python

  •0•0•1•0•Updated May 23, 2024May 23, 2024

• Methods_in_Microbiomics

  Public
  2•3•0•0•Updated May 22, 2024May 22, 2024

• NCCR_genomicsPipeline

  Public
  Python

  •2•1•3•0•Updated Apr 16, 2024Apr 16, 2024

• nccr_metat_ws

  Public
  R

  •0•0•0•0•Updated Dec 3, 2023Dec 3, 2023

• nccr_strainPrimer

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Nov 8, 2023Nov 8, 2023

• WISH_tag_generator

  Public
  Python

  •0•0•1•0•Updated Sep 22, 2023Sep 22, 2023

• scripts

  Public
  Various useful scripts

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Aug 23, 2023Aug 23, 2023

• phylloR

  Public
  R package for phyllosphere analysis

  R

  •1•3•1•0•Updated Aug 9, 2023Aug 9, 2023

• barbmuel_phylogenetic_diversity

  Public
  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jul 6, 2023Jul 6, 2023

• genlen

  Public
  Python

  •0•0•0•0•Updated Jun 16, 2023Jun 16, 2023

• platescan

  Public
  Software to quantify colony growth on arrayed plates

  Python

  •1•4•1•0•Updated May 5, 2023May 5, 2023

• HoneyScraper

  Public
  Python Script that scrapes Honeywell Midas Gas Detector Website.

  Python

  •0•2•0•0•Updated Feb 2, 2023Feb 2, 2023

• gtdb_genome_explorer

  Public
  Python

  •0•0•0•0•Updated Feb 1, 2023Feb 1, 2023

• modulesR

  Public
  R package to manage modules for system() calls

  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Nov 17, 2022Nov 17, 2022

• transator-container

  Public
  Container for PKS Predictor TransAtor

  Dockerfile

  •4•0•0•0•Updated Sep 28, 2022Sep 28, 2022

• TransATor-java

  Public
  JavaScript

  •5•0•0•0•Updated Sep 28, 2022Sep 28, 2022

• vogt_fungal_genomes_2022

  Public
  antiSMASH annotations for the genomes of Rhizopogon roseolus, Mariannaea elegans, Myrothecium verrucaria and Sphaerostilbella broomeana

  GNU General Public License v3.0

  •0•0•0•0•Updated Aug 24, 2022Aug 24, 2022

• vorholt_app

  Public
  Python

  •0•0•0•0•Updated Aug 16, 2022Aug 16, 2022

• apextra

  Public
  R

  •0•0•0•0•Updated Jul 6, 2022Jul 6, 2022

• PathoScope_Py3

  Public
  Pathoscope compatible with Python 3

  Python

  •

  GNU General Public License v3.0

  •26•0•0•0•Updated May 18, 2022May 18, 2022

• atgo

  Public
  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Oct 15, 2021Oct 15, 2021

• nccr_tnseq2

  Public
  Python

  •1•0•0•0•Updated Oct 6, 2021Oct 6, 2021

• nog2go

  Public
  R

  •0•0•0•0•Updated Feb 20, 2019Feb 20, 2019