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    35 repositories

    • image-registration

      Public
      Julia source code to stabilize and clean up videos
      Jupyter Notebook
      •0•1•0•0•Updated May 9, 2024May 9, 2024

    • ecg

      Public
      Pulling information from biological databases, and converting it into easy to use gmls for network science.
      Python
      •
      MIT License
      •2•3•14•2•Updated May 6, 2024May 6, 2024

    • HFSP

      Public
      Jupyter Notebook
      •0•1•0•0•Updated Mar 12, 2024Mar 12, 2024

    • Patents

      Public
      Jupyter Notebook
      •
      MIT License
      •1•1•0•0•Updated Mar 11, 2024Mar 11, 2024

    • INNLab

      Public
      A python/pytorch package for invertible neural networks
      machine-learninginvertible-neural-networks
      Python
      •
      GNU General Public License v3.0
      •9•62•4•0•Updated Jun 19, 2023Jun 19, 2023

    • pyphi-spectrum

      Public
      A toolbox for integrated information theory.
      Jupyter Notebook
      •
      Other
      •97•0•0•0•Updated Feb 10, 2023Feb 10, 2023

    • abfjs

      Public
      A package for reading Axon Binary Format (ABF) files
      JavaScript
      •
      MIT License
      •0•2•0•13•Updated Jan 3, 2023Jan 3, 2023

    • caim

      Public
      A toolkit for analyzing time series extracted from fluorescence imaging data
      JavaScript
      •
      MIT License
      •0•3•17•18•Updated Jan 3, 2023Jan 3, 2023

    • InChI

      Public
      InChI library with CMake build system
      C
      •
      Other
      •0•0•0•0•Updated Mar 3, 2022Mar 3, 2022

    • dglmoore

      Public
      Doug's Slush Repository
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Dec 14, 2021Dec 14, 2021

    • Neet

      Public
      Simulating and analyzing dynamical network models
      networknetworksciencenetworks-biologynetwork-biologydynamicsneet
      Python
      •
      Other
      •10•4•23•3•Updated Dec 14, 2021Dec 14, 2021

    • ImageExplorer.jl

      Public
      A simple tool to explore images generated from simulations
      Julia
      •
      MIT License
      •0•0•0•0•Updated Dec 14, 2021Dec 14, 2021

    • Imogen.jl

      Public
      Imogen is a package for estimating information-theoretic quantities from data
      Julia
      •
      MIT License
      •0•1•0•0•Updated Dec 14, 2021Dec 14, 2021

    • Inform

      Public
      A cross platform C library for information analysis of dynamical systems
      entropyinformation-theorymutual-informationentropy-ratetransfer-entropyactive-information
      C
      •
      MIT License
      •3•23•14•0•Updated Dec 14, 2021Dec 14, 2021

    • gPID

      Public
      Julia
      •1•1•0•0•Updated Dec 14, 2021Dec 14, 2021

    • fastpathways

      Public
      An implementation and generalization of Thurber's algorithm for orderable assembly spaces
      C++
      •0•0•3•0•Updated Dec 14, 2021Dec 14, 2021

    • Pathways.jl

      Public
      Julia
      •
      MIT License
      •0•1•0•0•Updated Oct 2, 2021Oct 2, 2021

    • Gomen.jl

      Public
      Simulating game-playing agents on a graph
      Julia
      •
      MIT License
      •0•0•0•0•Updated Aug 18, 2021Aug 18, 2021

    • chemevolve

      Public
      Tools for simulating chemical evolution
      Python
      •
      MIT License
      •1•3•0•0•Updated Jul 2, 2021Jul 2, 2021

    • CaimCore.jl

      Public
      A toolkit for analyzing time series extracted from fluorescence imaging data
      Julia
      •
      MIT License
      •0•1•0•0•Updated May 12, 2021May 12, 2021

    • yanborandom

      Public
      Yanbo's random projects
      Mathematica
      •0•0•0•0•Updated Jan 31, 2021Jan 31, 2021

    • parallel-programming-mpi

      Public
      A simple "tutorial" on parallel programming with MPI
      Python
      •0•0•0•0•Updated Aug 14, 2020Aug 14, 2020

    • randomneet

      Public
      A development package for Neet network randomizations.
      Python
      •
      Other
      •0•0•0•0•Updated Feb 18, 2020Feb 18, 2020

    • PyInform

      Public
      A Python Wrapper for the Inform Information Analysis Library
      Python
      •
      MIT License
      •9•49•10•0•Updated Dec 2, 2019Dec 2, 2019

    • informjs

      Public
      A node.js wrapper for the Inform information analysis library
      HTML
      •
      MIT License
      •0•0•0•0•Updated Sep 20, 2019Sep 20, 2019

    • gitting-stuff-done

      Public
      Gitting stuff done... maybe?
      0•2•1•4•Updated Aug 21, 2019Aug 21, 2019

    • rinform

      Public
      An R wrapper around the Inform library
      R
      •
      Other
      •2•4•6•0•Updated Nov 27, 2018Nov 27, 2018

    • RTFOOL.jl

      Public
      A Resource Theory for OoL
      Jupyter Notebook
      •
      Other
      •0•0•3•0•Updated Jul 4, 2018Jul 4, 2018

    • tensorflow_tutorial

      Public
      Jupyter Notebook
      •0•0•0•0•Updated May 23, 2018May 23, 2018

    • meet-julia

      Public
      Hi. My name is Julia.
      Jupyter Notebook
      •
      MIT License
      •1•1•0•0•Updated Apr 11, 2018Apr 11, 2018