Run R scripts #19
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name: Run R scripts | |
on: | |
workflow_dispatch: | |
jobs: | |
generate-data: | |
runs-on: ${{ matrix.config.os }} | |
container: ghcr.io/open-aims/seriatopora_analyses:main #put in the correct branch name | |
#container: ghcr.io/open-aims/${{ env.REPO }}:main #put in the correct branch name | |
name: ${{ matrix.config.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- {os: ubuntu-latest} | |
steps: | |
- name: test | |
run: | | |
echo "${{ Github.repository }}" | |
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
- uses: actions/checkout@v4 | |
with: | |
token: ${{ secrets.GITHUB_TOKEN }} | |
- name: Run Script | |
run: | | |
source("R/00_main.R") | |
shell: Rscript {0} |