Run R scripts #19
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| name: Run R scripts | |
| on: | |
| workflow_dispatch: | |
| jobs: | |
| generate-data: | |
| runs-on: ${{ matrix.config.os }} | |
| container: ghcr.io/open-aims/seriatopora_analyses:main #put in the correct branch name | |
| #container: ghcr.io/open-aims/${{ env.REPO }}:main #put in the correct branch name | |
| name: ${{ matrix.config.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: ubuntu-latest} | |
| steps: | |
| - name: test | |
| run: | | |
| echo "${{ Github.repository }}" | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - uses: actions/checkout@v4 | |
| with: | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Run Script | |
| run: | | |
| source("R/00_main.R") | |
| shell: Rscript {0} |