docs(master): Update docs of development line

master/_modules/niworkflows/interfaces/norm.html

@@ -454,7 +454,9 @@ <h1>Source code for niworkflows.interfaces.norm</h1><div class="highlight"><pre>
         <span class="n">data_dir</span> <span class="o">=</span> <span class="n">load_data</span><span class="p">()</span>
         <span class="c1"># Get a list of settings files that match the flavor.</span>
         <span class="n">filenames</span> <span class="o">=</span> <span class="p">[</span>
-            <span class="n">i</span> <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="n">data_dir</span><span class="o">.</span><span class="n">iterdir</span><span class="p">()</span> <span class="k">if</span> <span class="n">i</span><span class="o">.</span><span class="n">startswith</span><span class="p">(</span><span class="n">filestart</span><span class="p">)</span> <span class="ow">and</span> <span class="n">i</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s2">&quot;.json&quot;</span><span class="p">)</span>
+            <span class="n">path</span><span class="o">.</span><span class="n">name</span>
+            <span class="k">for</span> <span class="n">path</span> <span class="ow">in</span> <span class="n">data_dir</span><span class="o">.</span><span class="n">iterdir</span><span class="p">()</span>
+            <span class="k">if</span> <span class="n">path</span><span class="o">.</span><span class="n">name</span><span class="o">.</span><span class="n">startswith</span><span class="p">(</span><span class="n">filestart</span><span class="p">)</span> <span class="ow">and</span> <span class="n">path</span><span class="o">.</span><span class="n">name</span><span class="o">.</span><span class="n">endswith</span><span class="p">(</span><span class="s2">&quot;.json&quot;</span><span class="p">)</span>
         <span class="p">]</span>
         <span class="c1"># Return the settings files.</span>
         <span class="k">return</span> <span class="p">[</span><span class="nb">str</span><span class="p">(</span><span class="n">data_dir</span> <span class="o">/</span> <span class="n">f</span><span class="p">)</span> <span class="k">for</span> <span class="n">f</span> <span class="ow">in</span> <span class="nb">sorted</span><span class="p">(</span><span class="n">filenames</span><span class="p">)]</span>

master/api/niworkflows.interfaces.confounds.html

@@ -398,14 +398,14 @@
 indicates that the first and second exponential terms should be added.
 To retain the original terms, <code class="docutils literal notranslate"><span class="pre">1</span></code> <em>must</em> be included in the list.</p></li>
 <li><p><strong>variables</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#list" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code></a> of <a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">str</span></code></a>) – List of variables for which exponential terms should be computed.</p></li>
-<li><p><strong>data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1190.g0511c494a2)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – Table of values of all observations of all variables.</p></li>
+<li><p><strong>data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1269.gd4889bc616)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – Table of values of all observations of all variables.</p></li>
 </ul>
 </dd>
 <dt class="field-even">Returns<span class="colon">:</span></dt>
 <dd class="field-even"><p><ul class="simple">
 <li><p><strong>variables_exp</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#list" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code></a>) – A list of variables to include in the final data frame after adding
 the specified exponential terms.</p></li>
-<li><p><strong>data_exp</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1190.g0511c494a2)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – Table of values of all observations of all variables, including any
+<li><p><strong>data_exp</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1269.gd4889bc616)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – Table of values of all observations of all variables, including any
 specified exponential terms.</p></li>
 </ul>
 </p>
@@ -422,13 +422,13 @@
 <dd class="field-odd"><ul class="simple">
 <li><p><strong>expression</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">str</span></code></a>) – Formula expression: either a single variable or a variable group
 paired with an operation (exponentiation or differentiation).</p></li>
-<li><p><strong>parent_data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1190.g0511c494a2)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – The source data for the model expansion.</p></li>
+<li><p><strong>parent_data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1269.gd4889bc616)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – The source data for the model expansion.</p></li>
 </ul>
 </dd>
 <dt class="field-even">Returns<span class="colon">:</span></dt>
 <dd class="field-even"><p><ul class="simple">
 <li><p><strong>variables</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#list" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code></a>) – A list of variables in the provided formula expression.</p></li>
-<li><p><strong>data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1190.g0511c494a2)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – A tabulation of all terms in the provided formula expression.</p></li>
+<li><p><strong>data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1269.gd4889bc616)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – A tabulation of all terms in the provided formula expression.</p></li>
 </ul>
 </p>
 </dd>
@@ -472,7 +472,7 @@
 <p>Temporal derivatives and exponential terms are computed for all terms
 in the grouping symbols that they adjoin.</p>
 </li>
-<li><p><strong>parent_data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1190.g0511c494a2)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – A tabulation of all values usable in the model formula. Each additive
+<li><p><strong>parent_data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1269.gd4889bc616)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – A tabulation of all values usable in the model formula. Each additive
 term in <cite>model_formula</cite> should correspond either to a variable in this
 data frame or to instructions for operating on a variable (for
 instance, computing temporal derivatives or exponential terms).</p></li>
@@ -482,7 +482,7 @@
 <dd class="field-even"><p><ul class="simple">
 <li><p><strong>variables</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#list" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code></a> of <a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">str</span></code></a>) – A list of variables included in the model parsed from the provided
 formula.</p></li>
-<li><p><strong>data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1190.g0511c494a2)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – All values in the complete model.</p></li>
+<li><p><strong>data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1269.gd4889bc616)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – All values in the complete model.</p></li>
 </ul>
 </p>
 </dd>
@@ -496,7 +496,7 @@
 <dl class="field-list simple">
 <dt class="field-odd">Parameters<span class="colon">:</span></dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1190.g0511c494a2)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – A tabulation of observations from which spike regressors should be
+<li><p><strong>data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1269.gd4889bc616)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – A tabulation of observations from which spike regressors should be
 estimated.</p></li>
 <li><p><strong>criteria</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#dict" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">dict</span></code></a> of (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">str</span></code></a>, <code class="docutils literal notranslate"><span class="pre">'&gt;'</span></code> or <code class="docutils literal notranslate"><span class="pre">'&lt;'</span></code> or <a class="reference external" href="https://docs.python.org/3/library/functions.html#float" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code></a>)) – Criteria for generating a spike regressor. If, for a given frame, the
 value of the variable corresponding to the key exceeds the threshold
@@ -523,7 +523,7 @@
 <dd class="field-even"><p><strong>data</strong> – The input DataFrame with a column for each spike regressor.</p>
 </dd>
 <dt class="field-odd">Return type<span class="colon">:</span></dt>
-<dd class="field-odd"><p><a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1190.g0511c494a2)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a></p>
+<dd class="field-odd"><p><a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1269.gd4889bc616)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a></p>
 </dd>
 </dl>
 <p class="rubric">References</p>
@@ -549,14 +549,14 @@
 To retain the original terms, <code class="docutils literal notranslate"><span class="pre">0</span></code> <em>must</em> be included in the list.</p></li>
 <li><p><strong>variables</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#list" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code></a> of <a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#str" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">str</span></code></a>) – List of variables for which temporal derivative terms should be
 computed.</p></li>
-<li><p><strong>data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1190.g0511c494a2)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – Table of values of all observations of all variables.</p></li>
+<li><p><strong>data</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1269.gd4889bc616)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – Table of values of all observations of all variables.</p></li>
 </ul>
 </dd>
 <dt class="field-even">Returns<span class="colon">:</span></dt>
 <dd class="field-even"><p><ul class="simple">
 <li><p><strong>variables_deriv</strong> (<a class="reference external" href="https://docs.python.org/3/library/stdtypes.html#list" title="(in Python v3.11)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code></a>) – A list of variables to include in the final data frame after adding
 the specified derivative terms.</p></li>
-<li><p><strong>data_deriv</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1190.g0511c494a2)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – Table of values of all observations of all variables, including any
+<li><p><strong>data_deriv</strong> (<a class="reference external" href="https://pandas.pydata.org/pandas-docs/dev/reference/api/pandas.DataFrame.html#pandas.DataFrame" title="(in pandas v2.1.0.dev0+1269.gd4889bc616)"><code class="xref py py-obj docutils literal notranslate"><span class="pre">DataFrame</span></code></a>) – Table of values of all observations of all variables, including any
 specified derivative terms.</p></li>
 </ul>
 </p>